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Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa
Plant cell walls mostly comprise polysaccharides and proteins. The composition of monocots’ primary cell walls differs from that of dicots walls with respect to the type of hemicelluloses, the reduction of pectin abundance and the presence of aromatic molecules. Cell wall proteins (CWPs) differ amon...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6514655/ https://www.ncbi.nlm.nih.gov/pubmed/31018495 http://dx.doi.org/10.3390/ijms20081975 |
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author | Calderan-Rodrigues, Maria Juliana Guimarães Fonseca, Juliana de Moraes, Fabrício Edgar Vaz Setem, Laís Carmanhanis Begossi, Amanda Labate, Carlos Alberto |
author_facet | Calderan-Rodrigues, Maria Juliana Guimarães Fonseca, Juliana de Moraes, Fabrício Edgar Vaz Setem, Laís Carmanhanis Begossi, Amanda Labate, Carlos Alberto |
author_sort | Calderan-Rodrigues, Maria Juliana |
collection | PubMed |
description | Plant cell walls mostly comprise polysaccharides and proteins. The composition of monocots’ primary cell walls differs from that of dicots walls with respect to the type of hemicelluloses, the reduction of pectin abundance and the presence of aromatic molecules. Cell wall proteins (CWPs) differ among plant species, and their distribution within functional classes varies according to cell types, organs, developmental stages and/or environmental conditions. In this review, we go deeper into the findings of cell wall proteomics in monocot species and make a comparative analysis of the CWPs identified, considering their predicted functions, the organs analyzed, the plant developmental stage and their possible use as targets for biofuel production. Arabidopsis thaliana CWPs were considered as a reference to allow comparisons among different monocots, i.e., Brachypodium distachyon, Saccharum spp. and Oryza sativa. Altogether, 1159 CWPs have been acknowledged, and specificities and similarities are discussed. In particular, a search for A. thaliana homologs of CWPs identified so far in monocots allows the definition of monocot CWPs characteristics. Finally, the analysis of monocot CWPs appears to be a powerful tool for identifying candidate proteins of interest for tailoring cell walls to increase biomass yield of transformation for second-generation biofuels production. |
format | Online Article Text |
id | pubmed-6514655 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-65146552019-05-30 Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa Calderan-Rodrigues, Maria Juliana Guimarães Fonseca, Juliana de Moraes, Fabrício Edgar Vaz Setem, Laís Carmanhanis Begossi, Amanda Labate, Carlos Alberto Int J Mol Sci Review Plant cell walls mostly comprise polysaccharides and proteins. The composition of monocots’ primary cell walls differs from that of dicots walls with respect to the type of hemicelluloses, the reduction of pectin abundance and the presence of aromatic molecules. Cell wall proteins (CWPs) differ among plant species, and their distribution within functional classes varies according to cell types, organs, developmental stages and/or environmental conditions. In this review, we go deeper into the findings of cell wall proteomics in monocot species and make a comparative analysis of the CWPs identified, considering their predicted functions, the organs analyzed, the plant developmental stage and their possible use as targets for biofuel production. Arabidopsis thaliana CWPs were considered as a reference to allow comparisons among different monocots, i.e., Brachypodium distachyon, Saccharum spp. and Oryza sativa. Altogether, 1159 CWPs have been acknowledged, and specificities and similarities are discussed. In particular, a search for A. thaliana homologs of CWPs identified so far in monocots allows the definition of monocot CWPs characteristics. Finally, the analysis of monocot CWPs appears to be a powerful tool for identifying candidate proteins of interest for tailoring cell walls to increase biomass yield of transformation for second-generation biofuels production. MDPI 2019-04-23 /pmc/articles/PMC6514655/ /pubmed/31018495 http://dx.doi.org/10.3390/ijms20081975 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Calderan-Rodrigues, Maria Juliana Guimarães Fonseca, Juliana de Moraes, Fabrício Edgar Vaz Setem, Laís Carmanhanis Begossi, Amanda Labate, Carlos Alberto Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa |
title | Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa |
title_full | Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa |
title_fullStr | Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa |
title_full_unstemmed | Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa |
title_short | Plant Cell Wall Proteomics: A Focus on Monocot Species, Brachypodium distachyon, Saccharum spp. and Oryza sativa |
title_sort | plant cell wall proteomics: a focus on monocot species, brachypodium distachyon, saccharum spp. and oryza sativa |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6514655/ https://www.ncbi.nlm.nih.gov/pubmed/31018495 http://dx.doi.org/10.3390/ijms20081975 |
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