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Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron

Purple acid phosphatase (PAP) encoding genes are a multigene family. PAPs require iron (Fe) to exert their functions that are involved in diverse biological roles including Fe homeostasis. However, the possible roles of PAPs in response to excess Fe remain unknown. In this study, we attempted to und...

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Autores principales: Yin, Chaoyan, Wang, Fei, Fan, Huiqin, Fang, Yanming, Li, Wenfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515233/
https://www.ncbi.nlm.nih.gov/pubmed/31010077
http://dx.doi.org/10.3390/ijms20081954
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author Yin, Chaoyan
Wang, Fei
Fan, Huiqin
Fang, Yanming
Li, Wenfeng
author_facet Yin, Chaoyan
Wang, Fei
Fan, Huiqin
Fang, Yanming
Li, Wenfeng
author_sort Yin, Chaoyan
collection PubMed
description Purple acid phosphatase (PAP) encoding genes are a multigene family. PAPs require iron (Fe) to exert their functions that are involved in diverse biological roles including Fe homeostasis. However, the possible roles of PAPs in response to excess Fe remain unknown. In this study, we attempted to understand the regulation of PAPs by excess Fe in tea plant (Camellia sinensis). A genome-wide investigation of PAP encoding genes identified 19 CsPAP members based on the conserved motifs. The phylogenetic analysis showed that PAPs could be clustered into four groups, of which group II contained two specific cysteine-containing motifs “GGECGV” and “YERTC”. To explore the expression patterns of CsPAP genes in response to excessive Fe supply, RNA-sequencing (RNA-seq) analyses were performed to compare their transcript abundances between tea plants that are grown under normal and high iron conditions, respectively. 17 members were shown to be transcribed in both roots and leaves. When supplied with a high amount of iron, the expression levels of four genes were significantly changed. Of which, CsPAP15a, CsPAP23 and CsPAP27c were shown as downregulated, while the highly expressed CsPAP10a was upregulated. Moreover, CsPAP23 was found to be alternatively spliced, suggesting its post-transcriptional regulation. The present work implicates that some CsPAP genes could be associated with the responses of tea plants to the iron regime, which may offer a new direction towards a further understanding of iron homeostasis and provide the potential approaches for crop improvement in terms of iron biofortification.
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spelling pubmed-65152332019-05-30 Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron Yin, Chaoyan Wang, Fei Fan, Huiqin Fang, Yanming Li, Wenfeng Int J Mol Sci Article Purple acid phosphatase (PAP) encoding genes are a multigene family. PAPs require iron (Fe) to exert their functions that are involved in diverse biological roles including Fe homeostasis. However, the possible roles of PAPs in response to excess Fe remain unknown. In this study, we attempted to understand the regulation of PAPs by excess Fe in tea plant (Camellia sinensis). A genome-wide investigation of PAP encoding genes identified 19 CsPAP members based on the conserved motifs. The phylogenetic analysis showed that PAPs could be clustered into four groups, of which group II contained two specific cysteine-containing motifs “GGECGV” and “YERTC”. To explore the expression patterns of CsPAP genes in response to excessive Fe supply, RNA-sequencing (RNA-seq) analyses were performed to compare their transcript abundances between tea plants that are grown under normal and high iron conditions, respectively. 17 members were shown to be transcribed in both roots and leaves. When supplied with a high amount of iron, the expression levels of four genes were significantly changed. Of which, CsPAP15a, CsPAP23 and CsPAP27c were shown as downregulated, while the highly expressed CsPAP10a was upregulated. Moreover, CsPAP23 was found to be alternatively spliced, suggesting its post-transcriptional regulation. The present work implicates that some CsPAP genes could be associated with the responses of tea plants to the iron regime, which may offer a new direction towards a further understanding of iron homeostasis and provide the potential approaches for crop improvement in terms of iron biofortification. MDPI 2019-04-21 /pmc/articles/PMC6515233/ /pubmed/31010077 http://dx.doi.org/10.3390/ijms20081954 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yin, Chaoyan
Wang, Fei
Fan, Huiqin
Fang, Yanming
Li, Wenfeng
Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron
title Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron
title_full Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron
title_fullStr Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron
title_full_unstemmed Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron
title_short Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron
title_sort identification of tea plant purple acid phosphatase genes and their expression responses to excess iron
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515233/
https://www.ncbi.nlm.nih.gov/pubmed/31010077
http://dx.doi.org/10.3390/ijms20081954
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