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Convolutional Neural Network for Breathing Phase Detection in Lung Sounds

We applied deep learning to create an algorithm for breathing phase detection in lung sound recordings, and we compared the breathing phases detected by the algorithm and manually annotated by two experienced lung sound researchers. Our algorithm uses a convolutional neural network with spectrograms...

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Detalles Bibliográficos
Autores principales: Jácome, Cristina, Ravn, Johan, Holsbø, Einar, Aviles-Solis, Juan Carlos, Melbye, Hasse, Ailo Bongo, Lars
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515330/
https://www.ncbi.nlm.nih.gov/pubmed/30991690
http://dx.doi.org/10.3390/s19081798
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author Jácome, Cristina
Ravn, Johan
Holsbø, Einar
Aviles-Solis, Juan Carlos
Melbye, Hasse
Ailo Bongo, Lars
author_facet Jácome, Cristina
Ravn, Johan
Holsbø, Einar
Aviles-Solis, Juan Carlos
Melbye, Hasse
Ailo Bongo, Lars
author_sort Jácome, Cristina
collection PubMed
description We applied deep learning to create an algorithm for breathing phase detection in lung sound recordings, and we compared the breathing phases detected by the algorithm and manually annotated by two experienced lung sound researchers. Our algorithm uses a convolutional neural network with spectrograms as the features, removing the need to specify features explicitly. We trained and evaluated the algorithm using three subsets that are larger than previously seen in the literature. We evaluated the performance of the method using two methods. First, discrete count of agreed breathing phases (using 50% overlap between a pair of boxes), shows a mean agreement with lung sound experts of 97% for inspiration and 87% for expiration. Second, the fraction of time of agreement (in seconds) gives higher pseudo-kappa values for inspiration (0.73–0.88) than expiration (0.63–0.84), showing an average sensitivity of 97% and an average specificity of 84%. With both evaluation methods, the agreement between the annotators and the algorithm shows human level performance for the algorithm. The developed algorithm is valid for detecting breathing phases in lung sound recordings.
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spelling pubmed-65153302019-05-30 Convolutional Neural Network for Breathing Phase Detection in Lung Sounds Jácome, Cristina Ravn, Johan Holsbø, Einar Aviles-Solis, Juan Carlos Melbye, Hasse Ailo Bongo, Lars Sensors (Basel) Article We applied deep learning to create an algorithm for breathing phase detection in lung sound recordings, and we compared the breathing phases detected by the algorithm and manually annotated by two experienced lung sound researchers. Our algorithm uses a convolutional neural network with spectrograms as the features, removing the need to specify features explicitly. We trained and evaluated the algorithm using three subsets that are larger than previously seen in the literature. We evaluated the performance of the method using two methods. First, discrete count of agreed breathing phases (using 50% overlap between a pair of boxes), shows a mean agreement with lung sound experts of 97% for inspiration and 87% for expiration. Second, the fraction of time of agreement (in seconds) gives higher pseudo-kappa values for inspiration (0.73–0.88) than expiration (0.63–0.84), showing an average sensitivity of 97% and an average specificity of 84%. With both evaluation methods, the agreement between the annotators and the algorithm shows human level performance for the algorithm. The developed algorithm is valid for detecting breathing phases in lung sound recordings. MDPI 2019-04-15 /pmc/articles/PMC6515330/ /pubmed/30991690 http://dx.doi.org/10.3390/s19081798 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Jácome, Cristina
Ravn, Johan
Holsbø, Einar
Aviles-Solis, Juan Carlos
Melbye, Hasse
Ailo Bongo, Lars
Convolutional Neural Network for Breathing Phase Detection in Lung Sounds
title Convolutional Neural Network for Breathing Phase Detection in Lung Sounds
title_full Convolutional Neural Network for Breathing Phase Detection in Lung Sounds
title_fullStr Convolutional Neural Network for Breathing Phase Detection in Lung Sounds
title_full_unstemmed Convolutional Neural Network for Breathing Phase Detection in Lung Sounds
title_short Convolutional Neural Network for Breathing Phase Detection in Lung Sounds
title_sort convolutional neural network for breathing phase detection in lung sounds
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515330/
https://www.ncbi.nlm.nih.gov/pubmed/30991690
http://dx.doi.org/10.3390/s19081798
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