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Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor

Automatic detection of left ventricle myocardium is essential to subsequent cardiac image registration and tissue segmentation. However, it is considered challenging mainly because of the complex and varying shape of the myocardium and surrounding tissues across slices and phases. In this study, a h...

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Autores principales: Niu, Yanmin, Qin, Lan, Wang, Xuchu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515333/
https://www.ncbi.nlm.nih.gov/pubmed/31013869
http://dx.doi.org/10.3390/s19081766
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author Niu, Yanmin
Qin, Lan
Wang, Xuchu
author_facet Niu, Yanmin
Qin, Lan
Wang, Xuchu
author_sort Niu, Yanmin
collection PubMed
description Automatic detection of left ventricle myocardium is essential to subsequent cardiac image registration and tissue segmentation. However, it is considered challenging mainly because of the complex and varying shape of the myocardium and surrounding tissues across slices and phases. In this study, a hybrid model is proposed to detect myocardium in cardiac magnetic resonance (MR) images combining region proposal and deep feature classification and regression. The model firstly generates candidate regions using new structural similarity-enhanced supervoxel over-segmentation plus hierarchical clustering. Then it adopts a deep stacked sparse autoencoder (SSAE) network to learn the discriminative deep feature to represent the regions. Finally, the features are fed to train a novel nonlinear within-class neighborhood preserved soft margin support vector (C-SVC) classifier and multiple-output support vector ([Formula: see text]-SVR) regressor for refining the location of myocardium. To improve the stability and generalization, the model also takes hard negative sample mining strategy to fine-tune the SSAE and the classifier. The proposed model with impacts of different components were extensively evaluated and compared to related methods on public cardiac data set. Experimental results verified the effectiveness of proposed integrated components, and demonstrated that it was robust in myocardium localization and outperformed the state-of-the-art methods in terms of typical metrics. This study would be beneficial in some cardiac image processing such as region-of-interest cropping and left ventricle volume measurement.
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spelling pubmed-65153332019-05-30 Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor Niu, Yanmin Qin, Lan Wang, Xuchu Sensors (Basel) Article Automatic detection of left ventricle myocardium is essential to subsequent cardiac image registration and tissue segmentation. However, it is considered challenging mainly because of the complex and varying shape of the myocardium and surrounding tissues across slices and phases. In this study, a hybrid model is proposed to detect myocardium in cardiac magnetic resonance (MR) images combining region proposal and deep feature classification and regression. The model firstly generates candidate regions using new structural similarity-enhanced supervoxel over-segmentation plus hierarchical clustering. Then it adopts a deep stacked sparse autoencoder (SSAE) network to learn the discriminative deep feature to represent the regions. Finally, the features are fed to train a novel nonlinear within-class neighborhood preserved soft margin support vector (C-SVC) classifier and multiple-output support vector ([Formula: see text]-SVR) regressor for refining the location of myocardium. To improve the stability and generalization, the model also takes hard negative sample mining strategy to fine-tune the SSAE and the classifier. The proposed model with impacts of different components were extensively evaluated and compared to related methods on public cardiac data set. Experimental results verified the effectiveness of proposed integrated components, and demonstrated that it was robust in myocardium localization and outperformed the state-of-the-art methods in terms of typical metrics. This study would be beneficial in some cardiac image processing such as region-of-interest cropping and left ventricle volume measurement. MDPI 2019-04-13 /pmc/articles/PMC6515333/ /pubmed/31013869 http://dx.doi.org/10.3390/s19081766 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Niu, Yanmin
Qin, Lan
Wang, Xuchu
Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor
title Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor
title_full Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor
title_fullStr Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor
title_full_unstemmed Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor
title_short Myocardium Detection by Deep SSAE Feature and Within-Class Neighborhood Preserved Support Vector Classifier and Regressor
title_sort myocardium detection by deep ssae feature and within-class neighborhood preserved support vector classifier and regressor
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515333/
https://www.ncbi.nlm.nih.gov/pubmed/31013869
http://dx.doi.org/10.3390/s19081766
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AT qinlan myocardiumdetectionbydeepssaefeatureandwithinclassneighborhoodpreservedsupportvectorclassifierandregressor
AT wangxuchu myocardiumdetectionbydeepssaefeatureandwithinclassneighborhoodpreservedsupportvectorclassifierandregressor