Cargando…

Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State

Vibrio parahaemolyticus is a common pathogen which has become a major concern of seafood products. The bacteria in the viable but non-culturable (VBNC) state are unable to form colonies on growth media, but under appropriate conditions they can regain culturability. In this study, V. parahaemolyticu...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhong, Qingping, Wang, Bin, Wang, Jie, Liu, Yufei, Fang, Xiang, Liao, Zhenlin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6517545/
https://www.ncbi.nlm.nih.gov/pubmed/31134040
http://dx.doi.org/10.3389/fmicb.2019.01045
_version_ 1783418299487354880
author Zhong, Qingping
Wang, Bin
Wang, Jie
Liu, Yufei
Fang, Xiang
Liao, Zhenlin
author_facet Zhong, Qingping
Wang, Bin
Wang, Jie
Liu, Yufei
Fang, Xiang
Liao, Zhenlin
author_sort Zhong, Qingping
collection PubMed
description Vibrio parahaemolyticus is a common pathogen which has become a major concern of seafood products. The bacteria in the viable but non-culturable (VBNC) state are unable to form colonies on growth media, but under appropriate conditions they can regain culturability. In this study, V. parahaemolyticus was induced into VBNC state at low temperature and oligotrophic condition, and was resuscitated to culturable state. The aim of this study is to explore the comparative proteomic profiles of the resuscitation state compared with the VBNC state and the exponential phase of V. parahaemolyticus using isobaric tags for relative and absolute quantitation (iTRAQ) technique. The differentially expressed proteins (DEPs) were subjected to GO functional annotations and KEGG pathway analysis. The results indicated that a total of 429 proteins were identified as the significant DEPs in the resuscitation cells compared with the VBNC cells, including 330 up-regulated and 99 down-regulated DEPs. Meanwhile, the resuscitation cells displayed 25 up-regulated and 36 down-regulated DEPs (total of 61 DEPs) in comparison with the exponential phase cells. The remarkable DEPs including ribosomal proteins, ABC transporters, outer membrane proteins and flagellar proteins. GO annotation showed that the 429 DEPs were classified into 37 GO terms, of which 17 biological process (BP) terms, 9 cellular component (CC) terms and 11 molecular function (MF) terms. The up-regulated proteins presented in all GO terms except two terms of developmental process and reproduction. The 61 DEPs were assigned to 23 GO terms, the up- and down-regulated DEPs were both mainly involved in cellular process, establishment of localization, metabolic process and so on. KEGG pathway analysis revealed that the 429 DEPs were assigned to 35 KEGG pathways, and the pathways of ribosome, glyoxylate and dicarboxylate metabolism were significantly enriched. Moreover, the 61 DEPs located in 26 KEGG pathways, including the significantly enriched KEGG pathways of ABC transporters and two-component system. This study would contribute to a better understanding of the molecular mechanism underlying the resuscitation of the VBNC state of V. parahaemolyticus.
format Online
Article
Text
id pubmed-6517545
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-65175452019-05-27 Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State Zhong, Qingping Wang, Bin Wang, Jie Liu, Yufei Fang, Xiang Liao, Zhenlin Front Microbiol Microbiology Vibrio parahaemolyticus is a common pathogen which has become a major concern of seafood products. The bacteria in the viable but non-culturable (VBNC) state are unable to form colonies on growth media, but under appropriate conditions they can regain culturability. In this study, V. parahaemolyticus was induced into VBNC state at low temperature and oligotrophic condition, and was resuscitated to culturable state. The aim of this study is to explore the comparative proteomic profiles of the resuscitation state compared with the VBNC state and the exponential phase of V. parahaemolyticus using isobaric tags for relative and absolute quantitation (iTRAQ) technique. The differentially expressed proteins (DEPs) were subjected to GO functional annotations and KEGG pathway analysis. The results indicated that a total of 429 proteins were identified as the significant DEPs in the resuscitation cells compared with the VBNC cells, including 330 up-regulated and 99 down-regulated DEPs. Meanwhile, the resuscitation cells displayed 25 up-regulated and 36 down-regulated DEPs (total of 61 DEPs) in comparison with the exponential phase cells. The remarkable DEPs including ribosomal proteins, ABC transporters, outer membrane proteins and flagellar proteins. GO annotation showed that the 429 DEPs were classified into 37 GO terms, of which 17 biological process (BP) terms, 9 cellular component (CC) terms and 11 molecular function (MF) terms. The up-regulated proteins presented in all GO terms except two terms of developmental process and reproduction. The 61 DEPs were assigned to 23 GO terms, the up- and down-regulated DEPs were both mainly involved in cellular process, establishment of localization, metabolic process and so on. KEGG pathway analysis revealed that the 429 DEPs were assigned to 35 KEGG pathways, and the pathways of ribosome, glyoxylate and dicarboxylate metabolism were significantly enriched. Moreover, the 61 DEPs located in 26 KEGG pathways, including the significantly enriched KEGG pathways of ABC transporters and two-component system. This study would contribute to a better understanding of the molecular mechanism underlying the resuscitation of the VBNC state of V. parahaemolyticus. Frontiers Media S.A. 2019-05-08 /pmc/articles/PMC6517545/ /pubmed/31134040 http://dx.doi.org/10.3389/fmicb.2019.01045 Text en Copyright © 2019 Zhong, Wang, Wang, Liu, Fang and Liao. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Zhong, Qingping
Wang, Bin
Wang, Jie
Liu, Yufei
Fang, Xiang
Liao, Zhenlin
Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State
title Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State
title_full Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State
title_fullStr Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State
title_full_unstemmed Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State
title_short Global Proteomic Analysis of the Resuscitation State of Vibrio parahaemolyticus Compared With the Normal and Viable but Non-culturable State
title_sort global proteomic analysis of the resuscitation state of vibrio parahaemolyticus compared with the normal and viable but non-culturable state
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6517545/
https://www.ncbi.nlm.nih.gov/pubmed/31134040
http://dx.doi.org/10.3389/fmicb.2019.01045
work_keys_str_mv AT zhongqingping globalproteomicanalysisoftheresuscitationstateofvibrioparahaemolyticuscomparedwiththenormalandviablebutnonculturablestate
AT wangbin globalproteomicanalysisoftheresuscitationstateofvibrioparahaemolyticuscomparedwiththenormalandviablebutnonculturablestate
AT wangjie globalproteomicanalysisoftheresuscitationstateofvibrioparahaemolyticuscomparedwiththenormalandviablebutnonculturablestate
AT liuyufei globalproteomicanalysisoftheresuscitationstateofvibrioparahaemolyticuscomparedwiththenormalandviablebutnonculturablestate
AT fangxiang globalproteomicanalysisoftheresuscitationstateofvibrioparahaemolyticuscomparedwiththenormalandviablebutnonculturablestate
AT liaozhenlin globalproteomicanalysisoftheresuscitationstateofvibrioparahaemolyticuscomparedwiththenormalandviablebutnonculturablestate