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Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware

The revolution in low-cost consumer photography and computation provides fertile opportunity for a disruptive reduction in the cost of biomedical imaging. Conventional approaches to low-cost microscopy are fundamentally restricted, however, to modest field of view (FOV) and/or resolution. We report...

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Autores principales: Aidukas, Tomas, Eckert, Regina, Harvey, Andrew R., Waller, Laura, Konda, Pavan C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520337/
https://www.ncbi.nlm.nih.gov/pubmed/31092867
http://dx.doi.org/10.1038/s41598-019-43845-9
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author Aidukas, Tomas
Eckert, Regina
Harvey, Andrew R.
Waller, Laura
Konda, Pavan C.
author_facet Aidukas, Tomas
Eckert, Regina
Harvey, Andrew R.
Waller, Laura
Konda, Pavan C.
author_sort Aidukas, Tomas
collection PubMed
description The revolution in low-cost consumer photography and computation provides fertile opportunity for a disruptive reduction in the cost of biomedical imaging. Conventional approaches to low-cost microscopy are fundamentally restricted, however, to modest field of view (FOV) and/or resolution. We report a low-cost microscopy technique, implemented with a Raspberry Pi single-board computer and color camera combined with Fourier ptychography (FP), to computationally construct 25-megapixel images with sub-micron resolution. New image-construction techniques were developed to enable the use of the low-cost Bayer color sensor, to compensate for the highly aberrated re-used camera lens and to compensate for misalignments associated with the 3D-printed microscope structure. This high ratio of performance to cost is of particular interest to high-throughput microscopy applications, ranging from drug discovery and digital pathology to health screening in low-income countries. 3D models and assembly instructions of our microscope are made available for open source use.
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spelling pubmed-65203372019-05-24 Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware Aidukas, Tomas Eckert, Regina Harvey, Andrew R. Waller, Laura Konda, Pavan C. Sci Rep Article The revolution in low-cost consumer photography and computation provides fertile opportunity for a disruptive reduction in the cost of biomedical imaging. Conventional approaches to low-cost microscopy are fundamentally restricted, however, to modest field of view (FOV) and/or resolution. We report a low-cost microscopy technique, implemented with a Raspberry Pi single-board computer and color camera combined with Fourier ptychography (FP), to computationally construct 25-megapixel images with sub-micron resolution. New image-construction techniques were developed to enable the use of the low-cost Bayer color sensor, to compensate for the highly aberrated re-used camera lens and to compensate for misalignments associated with the 3D-printed microscope structure. This high ratio of performance to cost is of particular interest to high-throughput microscopy applications, ranging from drug discovery and digital pathology to health screening in low-income countries. 3D models and assembly instructions of our microscope are made available for open source use. Nature Publishing Group UK 2019-05-15 /pmc/articles/PMC6520337/ /pubmed/31092867 http://dx.doi.org/10.1038/s41598-019-43845-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Aidukas, Tomas
Eckert, Regina
Harvey, Andrew R.
Waller, Laura
Konda, Pavan C.
Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
title Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
title_full Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
title_fullStr Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
title_full_unstemmed Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
title_short Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
title_sort low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520337/
https://www.ncbi.nlm.nih.gov/pubmed/31092867
http://dx.doi.org/10.1038/s41598-019-43845-9
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