Cargando…

Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase

F(1)-ATPase is a rotary motor protein in which the central γ-subunit rotates inside the cylinder made of α(3)β(3) subunits. To investigate interactions between the γ shaft and the cylinder at the molecular scale, load was imposed on γ through a polystyrene bead by three-dimensional optical trapping...

Descripción completa

Detalles Bibliográficos
Autores principales: Naito, Tatsuya M., Masaike, Tomoko, Nakane, Daisuke, Sugawa, Mitsuhiro, Okada, Kaoru A., Nishizaka, Takayuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520343/
https://www.ncbi.nlm.nih.gov/pubmed/31092848
http://dx.doi.org/10.1038/s41598-019-43903-2
_version_ 1783418721682849792
author Naito, Tatsuya M.
Masaike, Tomoko
Nakane, Daisuke
Sugawa, Mitsuhiro
Okada, Kaoru A.
Nishizaka, Takayuki
author_facet Naito, Tatsuya M.
Masaike, Tomoko
Nakane, Daisuke
Sugawa, Mitsuhiro
Okada, Kaoru A.
Nishizaka, Takayuki
author_sort Naito, Tatsuya M.
collection PubMed
description F(1)-ATPase is a rotary motor protein in which the central γ-subunit rotates inside the cylinder made of α(3)β(3) subunits. To investigate interactions between the γ shaft and the cylinder at the molecular scale, load was imposed on γ through a polystyrene bead by three-dimensional optical trapping in the direction along which the shaft penetrates the cylinder. Pull-out event was observed under high-load, and thus load-dependency of lifetime of the interaction was estimated. Notably, accumulated counts of lifetime were comprised of fast and slow components. Both components exponentially dropped with imposed loads, suggesting that the binding energy is compensated by the work done by optical trapping. Because the mutant, in which the half of the shaft was deleted, showed only one fast component in the bond lifetime, the slow component is likely due to the native interaction mode held by multiple interfaces.
format Online
Article
Text
id pubmed-6520343
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-65203432019-05-24 Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase Naito, Tatsuya M. Masaike, Tomoko Nakane, Daisuke Sugawa, Mitsuhiro Okada, Kaoru A. Nishizaka, Takayuki Sci Rep Article F(1)-ATPase is a rotary motor protein in which the central γ-subunit rotates inside the cylinder made of α(3)β(3) subunits. To investigate interactions between the γ shaft and the cylinder at the molecular scale, load was imposed on γ through a polystyrene bead by three-dimensional optical trapping in the direction along which the shaft penetrates the cylinder. Pull-out event was observed under high-load, and thus load-dependency of lifetime of the interaction was estimated. Notably, accumulated counts of lifetime were comprised of fast and slow components. Both components exponentially dropped with imposed loads, suggesting that the binding energy is compensated by the work done by optical trapping. Because the mutant, in which the half of the shaft was deleted, showed only one fast component in the bond lifetime, the slow component is likely due to the native interaction mode held by multiple interfaces. Nature Publishing Group UK 2019-05-15 /pmc/articles/PMC6520343/ /pubmed/31092848 http://dx.doi.org/10.1038/s41598-019-43903-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Naito, Tatsuya M.
Masaike, Tomoko
Nakane, Daisuke
Sugawa, Mitsuhiro
Okada, Kaoru A.
Nishizaka, Takayuki
Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase
title Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase
title_full Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase
title_fullStr Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase
title_full_unstemmed Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase
title_short Single-molecule pull-out manipulation of the shaft of the rotary motor F(1)-ATPase
title_sort single-molecule pull-out manipulation of the shaft of the rotary motor f(1)-atpase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520343/
https://www.ncbi.nlm.nih.gov/pubmed/31092848
http://dx.doi.org/10.1038/s41598-019-43903-2
work_keys_str_mv AT naitotatsuyam singlemoleculepulloutmanipulationoftheshaftoftherotarymotorf1atpase
AT masaiketomoko singlemoleculepulloutmanipulationoftheshaftoftherotarymotorf1atpase
AT nakanedaisuke singlemoleculepulloutmanipulationoftheshaftoftherotarymotorf1atpase
AT sugawamitsuhiro singlemoleculepulloutmanipulationoftheshaftoftherotarymotorf1atpase
AT okadakaorua singlemoleculepulloutmanipulationoftheshaftoftherotarymotorf1atpase
AT nishizakatakayuki singlemoleculepulloutmanipulationoftheshaftoftherotarymotorf1atpase