Cargando…
Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
Selenoprotein genetic variations and suboptimal selenium (Se) levels may contribute to the risk of colorectal cancer (CRC) development. We examined the association between CRC risk and genotype for single nucleotide polymorphisms (SNPs) in selenoprotein and Se metabolic pathway genes. Illumina Golde...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520820/ https://www.ncbi.nlm.nih.gov/pubmed/31027226 http://dx.doi.org/10.3390/nu11040935 |
_version_ | 1783418816961708032 |
---|---|
author | Fedirko, Veronika Jenab, Mazda Méplan, Catherine Jones, Jeb S. Zhu, Wanzhe Schomburg, Lutz Siddiq, Afshan Hybsier, Sandra Overvad, Kim Tjønneland, Anne Omichessan, Hanane Perduca, Vittorio Boutron-Ruault, Marie-Christine Kühn, Tilman Katzke, Verena Aleksandrova, Krasimira Trichopoulou, Antonia Karakatsani, Anna Kotanidou, Anastasia Tumino, Rosario Panico, Salvatore Masala, Giovanna Agnoli, Claudia Naccarati, Alessio Bueno-de-Mesquita, Bas Vermeulen, Roel C.H. Weiderpass, Elisabete Skeie, Guri Nøst, Therese Haugdahl Lujan-Barroso, Leila Quirós, J. Ramón Huerta, José María Rodríguez-Barranco, Miguel Barricarte, Aurelio Gylling, Björn Harlid, Sophia Bradbury, Kathryn E. Wareham, Nick Khaw, Kay-Tee Gunter, Marc Murphy, Neil Freisling, Heinz Tsilidis, Kostas Aune, Dagfinn Riboli, Elio Hesketh, John E. Hughes, David J. |
author_facet | Fedirko, Veronika Jenab, Mazda Méplan, Catherine Jones, Jeb S. Zhu, Wanzhe Schomburg, Lutz Siddiq, Afshan Hybsier, Sandra Overvad, Kim Tjønneland, Anne Omichessan, Hanane Perduca, Vittorio Boutron-Ruault, Marie-Christine Kühn, Tilman Katzke, Verena Aleksandrova, Krasimira Trichopoulou, Antonia Karakatsani, Anna Kotanidou, Anastasia Tumino, Rosario Panico, Salvatore Masala, Giovanna Agnoli, Claudia Naccarati, Alessio Bueno-de-Mesquita, Bas Vermeulen, Roel C.H. Weiderpass, Elisabete Skeie, Guri Nøst, Therese Haugdahl Lujan-Barroso, Leila Quirós, J. Ramón Huerta, José María Rodríguez-Barranco, Miguel Barricarte, Aurelio Gylling, Björn Harlid, Sophia Bradbury, Kathryn E. Wareham, Nick Khaw, Kay-Tee Gunter, Marc Murphy, Neil Freisling, Heinz Tsilidis, Kostas Aune, Dagfinn Riboli, Elio Hesketh, John E. Hughes, David J. |
author_sort | Fedirko, Veronika |
collection | PubMed |
description | Selenoprotein genetic variations and suboptimal selenium (Se) levels may contribute to the risk of colorectal cancer (CRC) development. We examined the association between CRC risk and genotype for single nucleotide polymorphisms (SNPs) in selenoprotein and Se metabolic pathway genes. Illumina Goldengate assays were designed and resulted in the genotyping of 1040 variants in 154 genes from 1420 cases and 1421 controls within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. Multivariable logistic regression revealed an association of 144 individual SNPs from 63 Se pathway genes with CRC risk. However, regarding the selenoprotein genes, only TXNRD1 rs11111979 retained borderline statistical significance after adjustment for correlated tests (P(ACT) = 0.10; P(ACT) significance threshold was P < 0.1). SNPs in Wingless/Integrated (Wnt) and Transforming growth factor (TGF) beta-signaling genes (FRZB, SMAD3, SMAD7) from pathways affected by Se intake were also associated with CRC risk after multiple testing adjustments. Interactions with Se status (using existing serum Se and Selenoprotein P data) were tested at the SNP, gene, and pathway levels. Pathway analyses using the modified Adaptive Rank Truncated Product method suggested that genes and gene x Se status interactions in antioxidant, apoptosis, and TGF-beta signaling pathways may be associated with CRC risk. This study suggests that SNPs in the Se pathway alone or in combination with suboptimal Se status may contribute to CRC development. |
format | Online Article Text |
id | pubmed-6520820 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-65208202019-05-31 Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status Fedirko, Veronika Jenab, Mazda Méplan, Catherine Jones, Jeb S. Zhu, Wanzhe Schomburg, Lutz Siddiq, Afshan Hybsier, Sandra Overvad, Kim Tjønneland, Anne Omichessan, Hanane Perduca, Vittorio Boutron-Ruault, Marie-Christine Kühn, Tilman Katzke, Verena Aleksandrova, Krasimira Trichopoulou, Antonia Karakatsani, Anna Kotanidou, Anastasia Tumino, Rosario Panico, Salvatore Masala, Giovanna Agnoli, Claudia Naccarati, Alessio Bueno-de-Mesquita, Bas Vermeulen, Roel C.H. Weiderpass, Elisabete Skeie, Guri Nøst, Therese Haugdahl Lujan-Barroso, Leila Quirós, J. Ramón Huerta, José María Rodríguez-Barranco, Miguel Barricarte, Aurelio Gylling, Björn Harlid, Sophia Bradbury, Kathryn E. Wareham, Nick Khaw, Kay-Tee Gunter, Marc Murphy, Neil Freisling, Heinz Tsilidis, Kostas Aune, Dagfinn Riboli, Elio Hesketh, John E. Hughes, David J. Nutrients Article Selenoprotein genetic variations and suboptimal selenium (Se) levels may contribute to the risk of colorectal cancer (CRC) development. We examined the association between CRC risk and genotype for single nucleotide polymorphisms (SNPs) in selenoprotein and Se metabolic pathway genes. Illumina Goldengate assays were designed and resulted in the genotyping of 1040 variants in 154 genes from 1420 cases and 1421 controls within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. Multivariable logistic regression revealed an association of 144 individual SNPs from 63 Se pathway genes with CRC risk. However, regarding the selenoprotein genes, only TXNRD1 rs11111979 retained borderline statistical significance after adjustment for correlated tests (P(ACT) = 0.10; P(ACT) significance threshold was P < 0.1). SNPs in Wingless/Integrated (Wnt) and Transforming growth factor (TGF) beta-signaling genes (FRZB, SMAD3, SMAD7) from pathways affected by Se intake were also associated with CRC risk after multiple testing adjustments. Interactions with Se status (using existing serum Se and Selenoprotein P data) were tested at the SNP, gene, and pathway levels. Pathway analyses using the modified Adaptive Rank Truncated Product method suggested that genes and gene x Se status interactions in antioxidant, apoptosis, and TGF-beta signaling pathways may be associated with CRC risk. This study suggests that SNPs in the Se pathway alone or in combination with suboptimal Se status may contribute to CRC development. MDPI 2019-04-25 /pmc/articles/PMC6520820/ /pubmed/31027226 http://dx.doi.org/10.3390/nu11040935 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Fedirko, Veronika Jenab, Mazda Méplan, Catherine Jones, Jeb S. Zhu, Wanzhe Schomburg, Lutz Siddiq, Afshan Hybsier, Sandra Overvad, Kim Tjønneland, Anne Omichessan, Hanane Perduca, Vittorio Boutron-Ruault, Marie-Christine Kühn, Tilman Katzke, Verena Aleksandrova, Krasimira Trichopoulou, Antonia Karakatsani, Anna Kotanidou, Anastasia Tumino, Rosario Panico, Salvatore Masala, Giovanna Agnoli, Claudia Naccarati, Alessio Bueno-de-Mesquita, Bas Vermeulen, Roel C.H. Weiderpass, Elisabete Skeie, Guri Nøst, Therese Haugdahl Lujan-Barroso, Leila Quirós, J. Ramón Huerta, José María Rodríguez-Barranco, Miguel Barricarte, Aurelio Gylling, Björn Harlid, Sophia Bradbury, Kathryn E. Wareham, Nick Khaw, Kay-Tee Gunter, Marc Murphy, Neil Freisling, Heinz Tsilidis, Kostas Aune, Dagfinn Riboli, Elio Hesketh, John E. Hughes, David J. Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status |
title | Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status |
title_full | Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status |
title_fullStr | Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status |
title_full_unstemmed | Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status |
title_short | Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status |
title_sort | association of selenoprotein and selenium pathway genotypes with risk of colorectal cancer and interaction with selenium status |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520820/ https://www.ncbi.nlm.nih.gov/pubmed/31027226 http://dx.doi.org/10.3390/nu11040935 |
work_keys_str_mv | AT fedirkoveronika associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT jenabmazda associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT meplancatherine associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT jonesjebs associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT zhuwanzhe associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT schomburglutz associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT siddiqafshan associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT hybsiersandra associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT overvadkim associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT tjønnelandanne associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT omichessanhanane associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT perducavittorio associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT boutronruaultmariechristine associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT kuhntilman associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT katzkeverena associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT aleksandrovakrasimira associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT trichopoulouantonia associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT karakatsanianna associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT kotanidouanastasia associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT tuminorosario associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT panicosalvatore associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT masalagiovanna associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT agnoliclaudia associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT naccaratialessio associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT buenodemesquitabas associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT vermeulenroelch associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT weiderpasselisabete associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT skeieguri associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT nøsttheresehaugdahl associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT lujanbarrosoleila associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT quirosjramon associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT huertajosemaria associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT rodriguezbarrancomiguel associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT barricarteaurelio associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT gyllingbjorn associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT harlidsophia associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT bradburykathryne associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT warehamnick associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT khawkaytee associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT guntermarc associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT murphyneil associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT freislingheinz associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT tsilidiskostas associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT aunedagfinn associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT ribolielio associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT heskethjohne associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus AT hughesdavidj associationofselenoproteinandseleniumpathwaygenotypeswithriskofcolorectalcancerandinteractionwithseleniumstatus |