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Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status

Selenoprotein genetic variations and suboptimal selenium (Se) levels may contribute to the risk of colorectal cancer (CRC) development. We examined the association between CRC risk and genotype for single nucleotide polymorphisms (SNPs) in selenoprotein and Se metabolic pathway genes. Illumina Golde...

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Autores principales: Fedirko, Veronika, Jenab, Mazda, Méplan, Catherine, Jones, Jeb S., Zhu, Wanzhe, Schomburg, Lutz, Siddiq, Afshan, Hybsier, Sandra, Overvad, Kim, Tjønneland, Anne, Omichessan, Hanane, Perduca, Vittorio, Boutron-Ruault, Marie-Christine, Kühn, Tilman, Katzke, Verena, Aleksandrova, Krasimira, Trichopoulou, Antonia, Karakatsani, Anna, Kotanidou, Anastasia, Tumino, Rosario, Panico, Salvatore, Masala, Giovanna, Agnoli, Claudia, Naccarati, Alessio, Bueno-de-Mesquita, Bas, Vermeulen, Roel C.H., Weiderpass, Elisabete, Skeie, Guri, Nøst, Therese Haugdahl, Lujan-Barroso, Leila, Quirós, J. Ramón, Huerta, José María, Rodríguez-Barranco, Miguel, Barricarte, Aurelio, Gylling, Björn, Harlid, Sophia, Bradbury, Kathryn E., Wareham, Nick, Khaw, Kay-Tee, Gunter, Marc, Murphy, Neil, Freisling, Heinz, Tsilidis, Kostas, Aune, Dagfinn, Riboli, Elio, Hesketh, John E., Hughes, David J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520820/
https://www.ncbi.nlm.nih.gov/pubmed/31027226
http://dx.doi.org/10.3390/nu11040935
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author Fedirko, Veronika
Jenab, Mazda
Méplan, Catherine
Jones, Jeb S.
Zhu, Wanzhe
Schomburg, Lutz
Siddiq, Afshan
Hybsier, Sandra
Overvad, Kim
Tjønneland, Anne
Omichessan, Hanane
Perduca, Vittorio
Boutron-Ruault, Marie-Christine
Kühn, Tilman
Katzke, Verena
Aleksandrova, Krasimira
Trichopoulou, Antonia
Karakatsani, Anna
Kotanidou, Anastasia
Tumino, Rosario
Panico, Salvatore
Masala, Giovanna
Agnoli, Claudia
Naccarati, Alessio
Bueno-de-Mesquita, Bas
Vermeulen, Roel C.H.
Weiderpass, Elisabete
Skeie, Guri
Nøst, Therese Haugdahl
Lujan-Barroso, Leila
Quirós, J. Ramón
Huerta, José María
Rodríguez-Barranco, Miguel
Barricarte, Aurelio
Gylling, Björn
Harlid, Sophia
Bradbury, Kathryn E.
Wareham, Nick
Khaw, Kay-Tee
Gunter, Marc
Murphy, Neil
Freisling, Heinz
Tsilidis, Kostas
Aune, Dagfinn
Riboli, Elio
Hesketh, John E.
Hughes, David J.
author_facet Fedirko, Veronika
Jenab, Mazda
Méplan, Catherine
Jones, Jeb S.
Zhu, Wanzhe
Schomburg, Lutz
Siddiq, Afshan
Hybsier, Sandra
Overvad, Kim
Tjønneland, Anne
Omichessan, Hanane
Perduca, Vittorio
Boutron-Ruault, Marie-Christine
Kühn, Tilman
Katzke, Verena
Aleksandrova, Krasimira
Trichopoulou, Antonia
Karakatsani, Anna
Kotanidou, Anastasia
Tumino, Rosario
Panico, Salvatore
Masala, Giovanna
Agnoli, Claudia
Naccarati, Alessio
Bueno-de-Mesquita, Bas
Vermeulen, Roel C.H.
Weiderpass, Elisabete
Skeie, Guri
Nøst, Therese Haugdahl
Lujan-Barroso, Leila
Quirós, J. Ramón
Huerta, José María
Rodríguez-Barranco, Miguel
Barricarte, Aurelio
Gylling, Björn
Harlid, Sophia
Bradbury, Kathryn E.
Wareham, Nick
Khaw, Kay-Tee
Gunter, Marc
Murphy, Neil
Freisling, Heinz
Tsilidis, Kostas
Aune, Dagfinn
Riboli, Elio
Hesketh, John E.
Hughes, David J.
author_sort Fedirko, Veronika
collection PubMed
description Selenoprotein genetic variations and suboptimal selenium (Se) levels may contribute to the risk of colorectal cancer (CRC) development. We examined the association between CRC risk and genotype for single nucleotide polymorphisms (SNPs) in selenoprotein and Se metabolic pathway genes. Illumina Goldengate assays were designed and resulted in the genotyping of 1040 variants in 154 genes from 1420 cases and 1421 controls within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. Multivariable logistic regression revealed an association of 144 individual SNPs from 63 Se pathway genes with CRC risk. However, regarding the selenoprotein genes, only TXNRD1 rs11111979 retained borderline statistical significance after adjustment for correlated tests (P(ACT) = 0.10; P(ACT) significance threshold was P < 0.1). SNPs in Wingless/Integrated (Wnt) and Transforming growth factor (TGF) beta-signaling genes (FRZB, SMAD3, SMAD7) from pathways affected by Se intake were also associated with CRC risk after multiple testing adjustments. Interactions with Se status (using existing serum Se and Selenoprotein P data) were tested at the SNP, gene, and pathway levels. Pathway analyses using the modified Adaptive Rank Truncated Product method suggested that genes and gene x Se status interactions in antioxidant, apoptosis, and TGF-beta signaling pathways may be associated with CRC risk. This study suggests that SNPs in the Se pathway alone or in combination with suboptimal Se status may contribute to CRC development.
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spelling pubmed-65208202019-05-31 Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status Fedirko, Veronika Jenab, Mazda Méplan, Catherine Jones, Jeb S. Zhu, Wanzhe Schomburg, Lutz Siddiq, Afshan Hybsier, Sandra Overvad, Kim Tjønneland, Anne Omichessan, Hanane Perduca, Vittorio Boutron-Ruault, Marie-Christine Kühn, Tilman Katzke, Verena Aleksandrova, Krasimira Trichopoulou, Antonia Karakatsani, Anna Kotanidou, Anastasia Tumino, Rosario Panico, Salvatore Masala, Giovanna Agnoli, Claudia Naccarati, Alessio Bueno-de-Mesquita, Bas Vermeulen, Roel C.H. Weiderpass, Elisabete Skeie, Guri Nøst, Therese Haugdahl Lujan-Barroso, Leila Quirós, J. Ramón Huerta, José María Rodríguez-Barranco, Miguel Barricarte, Aurelio Gylling, Björn Harlid, Sophia Bradbury, Kathryn E. Wareham, Nick Khaw, Kay-Tee Gunter, Marc Murphy, Neil Freisling, Heinz Tsilidis, Kostas Aune, Dagfinn Riboli, Elio Hesketh, John E. Hughes, David J. Nutrients Article Selenoprotein genetic variations and suboptimal selenium (Se) levels may contribute to the risk of colorectal cancer (CRC) development. We examined the association between CRC risk and genotype for single nucleotide polymorphisms (SNPs) in selenoprotein and Se metabolic pathway genes. Illumina Goldengate assays were designed and resulted in the genotyping of 1040 variants in 154 genes from 1420 cases and 1421 controls within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. Multivariable logistic regression revealed an association of 144 individual SNPs from 63 Se pathway genes with CRC risk. However, regarding the selenoprotein genes, only TXNRD1 rs11111979 retained borderline statistical significance after adjustment for correlated tests (P(ACT) = 0.10; P(ACT) significance threshold was P < 0.1). SNPs in Wingless/Integrated (Wnt) and Transforming growth factor (TGF) beta-signaling genes (FRZB, SMAD3, SMAD7) from pathways affected by Se intake were also associated with CRC risk after multiple testing adjustments. Interactions with Se status (using existing serum Se and Selenoprotein P data) were tested at the SNP, gene, and pathway levels. Pathway analyses using the modified Adaptive Rank Truncated Product method suggested that genes and gene x Se status interactions in antioxidant, apoptosis, and TGF-beta signaling pathways may be associated with CRC risk. This study suggests that SNPs in the Se pathway alone or in combination with suboptimal Se status may contribute to CRC development. MDPI 2019-04-25 /pmc/articles/PMC6520820/ /pubmed/31027226 http://dx.doi.org/10.3390/nu11040935 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fedirko, Veronika
Jenab, Mazda
Méplan, Catherine
Jones, Jeb S.
Zhu, Wanzhe
Schomburg, Lutz
Siddiq, Afshan
Hybsier, Sandra
Overvad, Kim
Tjønneland, Anne
Omichessan, Hanane
Perduca, Vittorio
Boutron-Ruault, Marie-Christine
Kühn, Tilman
Katzke, Verena
Aleksandrova, Krasimira
Trichopoulou, Antonia
Karakatsani, Anna
Kotanidou, Anastasia
Tumino, Rosario
Panico, Salvatore
Masala, Giovanna
Agnoli, Claudia
Naccarati, Alessio
Bueno-de-Mesquita, Bas
Vermeulen, Roel C.H.
Weiderpass, Elisabete
Skeie, Guri
Nøst, Therese Haugdahl
Lujan-Barroso, Leila
Quirós, J. Ramón
Huerta, José María
Rodríguez-Barranco, Miguel
Barricarte, Aurelio
Gylling, Björn
Harlid, Sophia
Bradbury, Kathryn E.
Wareham, Nick
Khaw, Kay-Tee
Gunter, Marc
Murphy, Neil
Freisling, Heinz
Tsilidis, Kostas
Aune, Dagfinn
Riboli, Elio
Hesketh, John E.
Hughes, David J.
Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
title Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
title_full Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
title_fullStr Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
title_full_unstemmed Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
title_short Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status
title_sort association of selenoprotein and selenium pathway genotypes with risk of colorectal cancer and interaction with selenium status
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520820/
https://www.ncbi.nlm.nih.gov/pubmed/31027226
http://dx.doi.org/10.3390/nu11040935
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