Cargando…

Portrait of a cancer: mutational signature analyses for cancer diagnostics

BACKGROUND: In the past decade, systematic and comprehensive analyses of cancer genomes have identified cancer driver genes and revealed unprecedented insight into the molecular mechanisms underlying the initiation and progression of cancer. These studies illustrate that although every cancer has a...

Descripción completa

Detalles Bibliográficos
Autores principales: Van Hoeck, Arne, Tjoonk, Niels H., van Boxtel, Ruben, Cuppen, Edwin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521503/
https://www.ncbi.nlm.nih.gov/pubmed/31092228
http://dx.doi.org/10.1186/s12885-019-5677-2
_version_ 1783418973747937280
author Van Hoeck, Arne
Tjoonk, Niels H.
van Boxtel, Ruben
Cuppen, Edwin
author_facet Van Hoeck, Arne
Tjoonk, Niels H.
van Boxtel, Ruben
Cuppen, Edwin
author_sort Van Hoeck, Arne
collection PubMed
description BACKGROUND: In the past decade, systematic and comprehensive analyses of cancer genomes have identified cancer driver genes and revealed unprecedented insight into the molecular mechanisms underlying the initiation and progression of cancer. These studies illustrate that although every cancer has a unique genetic make-up, there are only a limited number of mechanisms that shape the mutational landscapes of cancer genomes, as reflected by characteristic computationally-derived mutational signatures. Importantly, the molecular mechanisms underlying specific signatures can now be dissected and coupled to treatment strategies. Systematic characterization of mutational signatures in a cancer patient’s genome may thus be a promising new tool for molecular tumor diagnosis and classification. RESULTS: In this review, we describe the status of mutational signature analysis in cancer genomes and discuss the opportunities and relevance, as well as future challenges, for further implementation of mutational signatures in clinical tumor diagnostics and therapy guidance. CONCLUSIONS: Scientific studies have illustrated the potential of mutational signature analysis in cancer research. As such, we believe that the implementation of mutational signature analysis within the diagnostic workflow will improve cancer diagnosis in the future.
format Online
Article
Text
id pubmed-6521503
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-65215032019-05-23 Portrait of a cancer: mutational signature analyses for cancer diagnostics Van Hoeck, Arne Tjoonk, Niels H. van Boxtel, Ruben Cuppen, Edwin BMC Cancer Review BACKGROUND: In the past decade, systematic and comprehensive analyses of cancer genomes have identified cancer driver genes and revealed unprecedented insight into the molecular mechanisms underlying the initiation and progression of cancer. These studies illustrate that although every cancer has a unique genetic make-up, there are only a limited number of mechanisms that shape the mutational landscapes of cancer genomes, as reflected by characteristic computationally-derived mutational signatures. Importantly, the molecular mechanisms underlying specific signatures can now be dissected and coupled to treatment strategies. Systematic characterization of mutational signatures in a cancer patient’s genome may thus be a promising new tool for molecular tumor diagnosis and classification. RESULTS: In this review, we describe the status of mutational signature analysis in cancer genomes and discuss the opportunities and relevance, as well as future challenges, for further implementation of mutational signatures in clinical tumor diagnostics and therapy guidance. CONCLUSIONS: Scientific studies have illustrated the potential of mutational signature analysis in cancer research. As such, we believe that the implementation of mutational signature analysis within the diagnostic workflow will improve cancer diagnosis in the future. BioMed Central 2019-05-15 /pmc/articles/PMC6521503/ /pubmed/31092228 http://dx.doi.org/10.1186/s12885-019-5677-2 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Review
Van Hoeck, Arne
Tjoonk, Niels H.
van Boxtel, Ruben
Cuppen, Edwin
Portrait of a cancer: mutational signature analyses for cancer diagnostics
title Portrait of a cancer: mutational signature analyses for cancer diagnostics
title_full Portrait of a cancer: mutational signature analyses for cancer diagnostics
title_fullStr Portrait of a cancer: mutational signature analyses for cancer diagnostics
title_full_unstemmed Portrait of a cancer: mutational signature analyses for cancer diagnostics
title_short Portrait of a cancer: mutational signature analyses for cancer diagnostics
title_sort portrait of a cancer: mutational signature analyses for cancer diagnostics
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521503/
https://www.ncbi.nlm.nih.gov/pubmed/31092228
http://dx.doi.org/10.1186/s12885-019-5677-2
work_keys_str_mv AT vanhoeckarne portraitofacancermutationalsignatureanalysesforcancerdiagnostics
AT tjoonknielsh portraitofacancermutationalsignatureanalysesforcancerdiagnostics
AT vanboxtelruben portraitofacancermutationalsignatureanalysesforcancerdiagnostics
AT cuppenedwin portraitofacancermutationalsignatureanalysesforcancerdiagnostics