Cargando…
Portrait of a cancer: mutational signature analyses for cancer diagnostics
BACKGROUND: In the past decade, systematic and comprehensive analyses of cancer genomes have identified cancer driver genes and revealed unprecedented insight into the molecular mechanisms underlying the initiation and progression of cancer. These studies illustrate that although every cancer has a...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521503/ https://www.ncbi.nlm.nih.gov/pubmed/31092228 http://dx.doi.org/10.1186/s12885-019-5677-2 |
_version_ | 1783418973747937280 |
---|---|
author | Van Hoeck, Arne Tjoonk, Niels H. van Boxtel, Ruben Cuppen, Edwin |
author_facet | Van Hoeck, Arne Tjoonk, Niels H. van Boxtel, Ruben Cuppen, Edwin |
author_sort | Van Hoeck, Arne |
collection | PubMed |
description | BACKGROUND: In the past decade, systematic and comprehensive analyses of cancer genomes have identified cancer driver genes and revealed unprecedented insight into the molecular mechanisms underlying the initiation and progression of cancer. These studies illustrate that although every cancer has a unique genetic make-up, there are only a limited number of mechanisms that shape the mutational landscapes of cancer genomes, as reflected by characteristic computationally-derived mutational signatures. Importantly, the molecular mechanisms underlying specific signatures can now be dissected and coupled to treatment strategies. Systematic characterization of mutational signatures in a cancer patient’s genome may thus be a promising new tool for molecular tumor diagnosis and classification. RESULTS: In this review, we describe the status of mutational signature analysis in cancer genomes and discuss the opportunities and relevance, as well as future challenges, for further implementation of mutational signatures in clinical tumor diagnostics and therapy guidance. CONCLUSIONS: Scientific studies have illustrated the potential of mutational signature analysis in cancer research. As such, we believe that the implementation of mutational signature analysis within the diagnostic workflow will improve cancer diagnosis in the future. |
format | Online Article Text |
id | pubmed-6521503 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-65215032019-05-23 Portrait of a cancer: mutational signature analyses for cancer diagnostics Van Hoeck, Arne Tjoonk, Niels H. van Boxtel, Ruben Cuppen, Edwin BMC Cancer Review BACKGROUND: In the past decade, systematic and comprehensive analyses of cancer genomes have identified cancer driver genes and revealed unprecedented insight into the molecular mechanisms underlying the initiation and progression of cancer. These studies illustrate that although every cancer has a unique genetic make-up, there are only a limited number of mechanisms that shape the mutational landscapes of cancer genomes, as reflected by characteristic computationally-derived mutational signatures. Importantly, the molecular mechanisms underlying specific signatures can now be dissected and coupled to treatment strategies. Systematic characterization of mutational signatures in a cancer patient’s genome may thus be a promising new tool for molecular tumor diagnosis and classification. RESULTS: In this review, we describe the status of mutational signature analysis in cancer genomes and discuss the opportunities and relevance, as well as future challenges, for further implementation of mutational signatures in clinical tumor diagnostics and therapy guidance. CONCLUSIONS: Scientific studies have illustrated the potential of mutational signature analysis in cancer research. As such, we believe that the implementation of mutational signature analysis within the diagnostic workflow will improve cancer diagnosis in the future. BioMed Central 2019-05-15 /pmc/articles/PMC6521503/ /pubmed/31092228 http://dx.doi.org/10.1186/s12885-019-5677-2 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Review Van Hoeck, Arne Tjoonk, Niels H. van Boxtel, Ruben Cuppen, Edwin Portrait of a cancer: mutational signature analyses for cancer diagnostics |
title | Portrait of a cancer: mutational signature analyses for cancer diagnostics |
title_full | Portrait of a cancer: mutational signature analyses for cancer diagnostics |
title_fullStr | Portrait of a cancer: mutational signature analyses for cancer diagnostics |
title_full_unstemmed | Portrait of a cancer: mutational signature analyses for cancer diagnostics |
title_short | Portrait of a cancer: mutational signature analyses for cancer diagnostics |
title_sort | portrait of a cancer: mutational signature analyses for cancer diagnostics |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521503/ https://www.ncbi.nlm.nih.gov/pubmed/31092228 http://dx.doi.org/10.1186/s12885-019-5677-2 |
work_keys_str_mv | AT vanhoeckarne portraitofacancermutationalsignatureanalysesforcancerdiagnostics AT tjoonknielsh portraitofacancermutationalsignatureanalysesforcancerdiagnostics AT vanboxtelruben portraitofacancermutationalsignatureanalysesforcancerdiagnostics AT cuppenedwin portraitofacancermutationalsignatureanalysesforcancerdiagnostics |