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Automatic classification of focal liver lesions based on MRI and risk factors

OBJECTIVES: Accurate classification of focal liver lesions is an important part of liver disease diagnostics. In clinical practice, the lesion type is often determined from the abdominal MR examination, which includes T2-weighted and dynamic contrast enhanced (DCE) MR images. To date, only T2-weight...

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Autores principales: Jansen, Mariëlle J. A., Kuijf, Hugo J., Veldhuis, Wouter B., Wessels, Frank J., Viergever, Max A., Pluim, Josien P. W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522218/
https://www.ncbi.nlm.nih.gov/pubmed/31095624
http://dx.doi.org/10.1371/journal.pone.0217053
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author Jansen, Mariëlle J. A.
Kuijf, Hugo J.
Veldhuis, Wouter B.
Wessels, Frank J.
Viergever, Max A.
Pluim, Josien P. W.
author_facet Jansen, Mariëlle J. A.
Kuijf, Hugo J.
Veldhuis, Wouter B.
Wessels, Frank J.
Viergever, Max A.
Pluim, Josien P. W.
author_sort Jansen, Mariëlle J. A.
collection PubMed
description OBJECTIVES: Accurate classification of focal liver lesions is an important part of liver disease diagnostics. In clinical practice, the lesion type is often determined from the abdominal MR examination, which includes T2-weighted and dynamic contrast enhanced (DCE) MR images. To date, only T2-weighted images are exploited for automatic classification of focal liver lesions. In this study additional MR sequences and risk factors are used for automatic classification to improve the results and to make a step forward to a clinically useful aid for radiologists. MATERIALS AND METHODS: Clinical MRI data sets of 95 patients with in total 125 benign lesions (40 adenomas, 29 cysts and 56 hemangiomas) and 88 malignant lesions (30 hepatocellular carcinomas (HCC) and 58 metastases) were included in this study. Contrast curve, gray level histogram, and gray level co-occurrence matrix texture features were extracted from the DCE-MR and T2-weighted images. In addition, risk factors including the presence of steatosis, cirrhosis, and a known primary tumor were used as features. Fifty features with the highest ANOVA F-score were selected and fed to an extremely randomized trees classifier. The classifier evaluation was performed using the leave-one-out principle and receiver operating characteristic (ROC) curve analysis. RESULTS: The overall accuracy for the classification of the five major focal liver lesion types is 0.77. The sensitivity/specificity is 0.80/0.78, 0.93/0.93, 0.84/0.82, 0.73/0.56, and 0.62/0.77 for adenoma, cyst, hemangioma, HCC, and metastasis, respectively. CONCLUSION: The proposed classification system using features derived from clinical DCE-MR and T2-weighted images, with additional risk factors is able to differentiate five common types of lesions and is a step forward to a clinically useful aid for focal liver lesion diagnosis.
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spelling pubmed-65222182019-05-31 Automatic classification of focal liver lesions based on MRI and risk factors Jansen, Mariëlle J. A. Kuijf, Hugo J. Veldhuis, Wouter B. Wessels, Frank J. Viergever, Max A. Pluim, Josien P. W. PLoS One Research Article OBJECTIVES: Accurate classification of focal liver lesions is an important part of liver disease diagnostics. In clinical practice, the lesion type is often determined from the abdominal MR examination, which includes T2-weighted and dynamic contrast enhanced (DCE) MR images. To date, only T2-weighted images are exploited for automatic classification of focal liver lesions. In this study additional MR sequences and risk factors are used for automatic classification to improve the results and to make a step forward to a clinically useful aid for radiologists. MATERIALS AND METHODS: Clinical MRI data sets of 95 patients with in total 125 benign lesions (40 adenomas, 29 cysts and 56 hemangiomas) and 88 malignant lesions (30 hepatocellular carcinomas (HCC) and 58 metastases) were included in this study. Contrast curve, gray level histogram, and gray level co-occurrence matrix texture features were extracted from the DCE-MR and T2-weighted images. In addition, risk factors including the presence of steatosis, cirrhosis, and a known primary tumor were used as features. Fifty features with the highest ANOVA F-score were selected and fed to an extremely randomized trees classifier. The classifier evaluation was performed using the leave-one-out principle and receiver operating characteristic (ROC) curve analysis. RESULTS: The overall accuracy for the classification of the five major focal liver lesion types is 0.77. The sensitivity/specificity is 0.80/0.78, 0.93/0.93, 0.84/0.82, 0.73/0.56, and 0.62/0.77 for adenoma, cyst, hemangioma, HCC, and metastasis, respectively. CONCLUSION: The proposed classification system using features derived from clinical DCE-MR and T2-weighted images, with additional risk factors is able to differentiate five common types of lesions and is a step forward to a clinically useful aid for focal liver lesion diagnosis. Public Library of Science 2019-05-16 /pmc/articles/PMC6522218/ /pubmed/31095624 http://dx.doi.org/10.1371/journal.pone.0217053 Text en © 2019 Jansen et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Jansen, Mariëlle J. A.
Kuijf, Hugo J.
Veldhuis, Wouter B.
Wessels, Frank J.
Viergever, Max A.
Pluim, Josien P. W.
Automatic classification of focal liver lesions based on MRI and risk factors
title Automatic classification of focal liver lesions based on MRI and risk factors
title_full Automatic classification of focal liver lesions based on MRI and risk factors
title_fullStr Automatic classification of focal liver lesions based on MRI and risk factors
title_full_unstemmed Automatic classification of focal liver lesions based on MRI and risk factors
title_short Automatic classification of focal liver lesions based on MRI and risk factors
title_sort automatic classification of focal liver lesions based on mri and risk factors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522218/
https://www.ncbi.nlm.nih.gov/pubmed/31095624
http://dx.doi.org/10.1371/journal.pone.0217053
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