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Spectral Spatial Variation

Automatic carcinoma detection from hyper/multi spectral images is of essential importance due to the fact that these images cannot be presented directly to the clinician. However, standard approaches for carcinoma detection use hundreds or even thousands of features. This would cost a high amount of...

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Autores principales: Hohmann, Martin, Albrecht, Heinz, Mudter, Jonas, Nagulin, Konstantin Yu, Klämpfl, Florian, Schmidt, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6525256/
https://www.ncbi.nlm.nih.gov/pubmed/31101855
http://dx.doi.org/10.1038/s41598-019-43971-4
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author Hohmann, Martin
Albrecht, Heinz
Mudter, Jonas
Nagulin, Konstantin Yu
Klämpfl, Florian
Schmidt, Michael
author_facet Hohmann, Martin
Albrecht, Heinz
Mudter, Jonas
Nagulin, Konstantin Yu
Klämpfl, Florian
Schmidt, Michael
author_sort Hohmann, Martin
collection PubMed
description Automatic carcinoma detection from hyper/multi spectral images is of essential importance due to the fact that these images cannot be presented directly to the clinician. However, standard approaches for carcinoma detection use hundreds or even thousands of features. This would cost a high amount of RAM (random access memory) for a pixel wise analysis and would slow down the classification or make it even impossible on standard PCs. To overcome this, strong features are required. We propose that the spectral-spatial-variation (SSV) is one of these strong features. SSV is the residuum of the three dimensional hyper spectral data cube minus its approximation with a fitting in a small volume of the 3D image. By using it, the classification results of carcinoma detection in the stomach with multi spectral imaging will be increase significantly compared to not using the SSV. In some cases, the AUC can be even as high as by the usage of 72 spatial features.
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spelling pubmed-65252562019-05-29 Spectral Spatial Variation Hohmann, Martin Albrecht, Heinz Mudter, Jonas Nagulin, Konstantin Yu Klämpfl, Florian Schmidt, Michael Sci Rep Article Automatic carcinoma detection from hyper/multi spectral images is of essential importance due to the fact that these images cannot be presented directly to the clinician. However, standard approaches for carcinoma detection use hundreds or even thousands of features. This would cost a high amount of RAM (random access memory) for a pixel wise analysis and would slow down the classification or make it even impossible on standard PCs. To overcome this, strong features are required. We propose that the spectral-spatial-variation (SSV) is one of these strong features. SSV is the residuum of the three dimensional hyper spectral data cube minus its approximation with a fitting in a small volume of the 3D image. By using it, the classification results of carcinoma detection in the stomach with multi spectral imaging will be increase significantly compared to not using the SSV. In some cases, the AUC can be even as high as by the usage of 72 spatial features. Nature Publishing Group UK 2019-05-17 /pmc/articles/PMC6525256/ /pubmed/31101855 http://dx.doi.org/10.1038/s41598-019-43971-4 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hohmann, Martin
Albrecht, Heinz
Mudter, Jonas
Nagulin, Konstantin Yu
Klämpfl, Florian
Schmidt, Michael
Spectral Spatial Variation
title Spectral Spatial Variation
title_full Spectral Spatial Variation
title_fullStr Spectral Spatial Variation
title_full_unstemmed Spectral Spatial Variation
title_short Spectral Spatial Variation
title_sort spectral spatial variation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6525256/
https://www.ncbi.nlm.nih.gov/pubmed/31101855
http://dx.doi.org/10.1038/s41598-019-43971-4
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