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Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida

BACKGROUND: Pasteurella multocida (P. multocida) is a bacterium that causes bovine respiratory disease (BRD) and haemorrhagic septicaemia (HS) in cattle, buffaloes and bison. Rapid point-of-care diagnosis or regular testing of Pasteurellosis, therefore, could contribute greatly to early detection, a...

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Autores principales: Zhao, Guimin, He, Hongbin, Wang, Hongmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6525368/
https://www.ncbi.nlm.nih.gov/pubmed/31101109
http://dx.doi.org/10.1186/s12917-019-1889-6
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author Zhao, Guimin
He, Hongbin
Wang, Hongmei
author_facet Zhao, Guimin
He, Hongbin
Wang, Hongmei
author_sort Zhao, Guimin
collection PubMed
description BACKGROUND: Pasteurella multocida (P. multocida) is a bacterium that causes bovine respiratory disease (BRD) and haemorrhagic septicaemia (HS) in cattle, buffaloes and bison. Rapid point-of-care diagnosis or regular testing of Pasteurellosis, therefore, could contribute greatly to early detection, and screening infected animal is important. Up to now, there are no published reports on the use of recombinase polymerase amplification (RPA) combined with a lateral flow dipstick (LFD) for P. multocida detection. RESULTS: This study proposes a promising isothermal detection method for P. multocida with the potential to be developed as an on-site test for Pasteurellosis. The method includes an RPA combined with LFD. First, the analytical sensitivity and specificity of P. multocida RPA-LFD were tested. The RPA-LFD, performed at 39 °C, successfully detected P. multocida DNA in 30 min, with a detection limit of up to 120 copies per reaction. Then, the practicability of RPA-LFD was analysed using 62 nasal swabs and 33 fresh lungs samples from 17 different dairy farms. Compared to real-time quantitative PCR (qPCR), the RPA-LFD assay yielded a clinical specificity of 95.15%, positive predictive value (PPV) of 95.15% and 0.958 kappa coefficient. Compared with the culture method, it achieved 100% sensitivity, 67.20% specificity and a 0.572 kappa coefficient. CONCLUSIONS: These results combined with the simple conditions required for the performance of the RPA-LFD assay, have demonstrated the effectiveness and practicability of the method for development into a regular on-site protocol for the diagnosis of Pasteurellosis.
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spelling pubmed-65253682019-05-24 Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida Zhao, Guimin He, Hongbin Wang, Hongmei BMC Vet Res Methodology Article BACKGROUND: Pasteurella multocida (P. multocida) is a bacterium that causes bovine respiratory disease (BRD) and haemorrhagic septicaemia (HS) in cattle, buffaloes and bison. Rapid point-of-care diagnosis or regular testing of Pasteurellosis, therefore, could contribute greatly to early detection, and screening infected animal is important. Up to now, there are no published reports on the use of recombinase polymerase amplification (RPA) combined with a lateral flow dipstick (LFD) for P. multocida detection. RESULTS: This study proposes a promising isothermal detection method for P. multocida with the potential to be developed as an on-site test for Pasteurellosis. The method includes an RPA combined with LFD. First, the analytical sensitivity and specificity of P. multocida RPA-LFD were tested. The RPA-LFD, performed at 39 °C, successfully detected P. multocida DNA in 30 min, with a detection limit of up to 120 copies per reaction. Then, the practicability of RPA-LFD was analysed using 62 nasal swabs and 33 fresh lungs samples from 17 different dairy farms. Compared to real-time quantitative PCR (qPCR), the RPA-LFD assay yielded a clinical specificity of 95.15%, positive predictive value (PPV) of 95.15% and 0.958 kappa coefficient. Compared with the culture method, it achieved 100% sensitivity, 67.20% specificity and a 0.572 kappa coefficient. CONCLUSIONS: These results combined with the simple conditions required for the performance of the RPA-LFD assay, have demonstrated the effectiveness and practicability of the method for development into a regular on-site protocol for the diagnosis of Pasteurellosis. BioMed Central 2019-05-17 /pmc/articles/PMC6525368/ /pubmed/31101109 http://dx.doi.org/10.1186/s12917-019-1889-6 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology Article
Zhao, Guimin
He, Hongbin
Wang, Hongmei
Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida
title Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida
title_full Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida
title_fullStr Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida
title_full_unstemmed Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida
title_short Use of a recombinase polymerase amplification commercial kit for rapid visual detection of Pasteurella multocida
title_sort use of a recombinase polymerase amplification commercial kit for rapid visual detection of pasteurella multocida
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6525368/
https://www.ncbi.nlm.nih.gov/pubmed/31101109
http://dx.doi.org/10.1186/s12917-019-1889-6
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