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Resonant model—A new paradigm for modeling an action potential of biological cells

Organ level simulation of bioelectric behavior in the body benefits from flexible and efficient models of cellular membrane potential. These computational organ and cell models can be used to study the impact of pharmaceutical drugs, test hypotheses, assess risk and for closed-loop validation of med...

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Autores principales: Sehgal, Sucheta, Patel, Nitish D., Malik, Avinash, Roop, Partha S., Trew, Mark L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6530846/
https://www.ncbi.nlm.nih.gov/pubmed/31116780
http://dx.doi.org/10.1371/journal.pone.0216999
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author Sehgal, Sucheta
Patel, Nitish D.
Malik, Avinash
Roop, Partha S.
Trew, Mark L.
author_facet Sehgal, Sucheta
Patel, Nitish D.
Malik, Avinash
Roop, Partha S.
Trew, Mark L.
author_sort Sehgal, Sucheta
collection PubMed
description Organ level simulation of bioelectric behavior in the body benefits from flexible and efficient models of cellular membrane potential. These computational organ and cell models can be used to study the impact of pharmaceutical drugs, test hypotheses, assess risk and for closed-loop validation of medical devices. To move closer to the real-time requirements of this modeling a new flexible Fourier based general membrane potential model, called as a Resonant model, is developed that is computationally inexpensive. The new model accurately reproduces non-linear potential morphologies for a variety of cell types. Specifically, the method is used to model human and rabbit sinoatrial node, human ventricular myocyte and squid giant axon electrophysiology. The Resonant models are validated with experimental data and with other published models. Dynamic changes in biological conditions are modeled with changing model coefficients and this approach enables ionic channel alterations to be captured. The Resonant model is used to simulate entrainment between competing sinoatrial node cells. These models can be easily implemented in low-cost digital hardware and an alternative, resource-efficient implementations of sine and cosine functions are presented and it is shown that a Fourier term is produced with two additions and a binary shift.
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spelling pubmed-65308462019-05-31 Resonant model—A new paradigm for modeling an action potential of biological cells Sehgal, Sucheta Patel, Nitish D. Malik, Avinash Roop, Partha S. Trew, Mark L. PLoS One Research Article Organ level simulation of bioelectric behavior in the body benefits from flexible and efficient models of cellular membrane potential. These computational organ and cell models can be used to study the impact of pharmaceutical drugs, test hypotheses, assess risk and for closed-loop validation of medical devices. To move closer to the real-time requirements of this modeling a new flexible Fourier based general membrane potential model, called as a Resonant model, is developed that is computationally inexpensive. The new model accurately reproduces non-linear potential morphologies for a variety of cell types. Specifically, the method is used to model human and rabbit sinoatrial node, human ventricular myocyte and squid giant axon electrophysiology. The Resonant models are validated with experimental data and with other published models. Dynamic changes in biological conditions are modeled with changing model coefficients and this approach enables ionic channel alterations to be captured. The Resonant model is used to simulate entrainment between competing sinoatrial node cells. These models can be easily implemented in low-cost digital hardware and an alternative, resource-efficient implementations of sine and cosine functions are presented and it is shown that a Fourier term is produced with two additions and a binary shift. Public Library of Science 2019-05-22 /pmc/articles/PMC6530846/ /pubmed/31116780 http://dx.doi.org/10.1371/journal.pone.0216999 Text en © 2019 Sehgal et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sehgal, Sucheta
Patel, Nitish D.
Malik, Avinash
Roop, Partha S.
Trew, Mark L.
Resonant model—A new paradigm for modeling an action potential of biological cells
title Resonant model—A new paradigm for modeling an action potential of biological cells
title_full Resonant model—A new paradigm for modeling an action potential of biological cells
title_fullStr Resonant model—A new paradigm for modeling an action potential of biological cells
title_full_unstemmed Resonant model—A new paradigm for modeling an action potential of biological cells
title_short Resonant model—A new paradigm for modeling an action potential of biological cells
title_sort resonant model—a new paradigm for modeling an action potential of biological cells
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6530846/
https://www.ncbi.nlm.nih.gov/pubmed/31116780
http://dx.doi.org/10.1371/journal.pone.0216999
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