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A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising
The advent of Fluorescence Microscopy over the last few years have dramatically improved the problem of visualization and tracking of specific cellular objects for biological inference. But like any other imaging system, fluorescence microscopy has its own limitations. The resultant images suffer fr...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6531475/ https://www.ncbi.nlm.nih.gov/pubmed/31118450 http://dx.doi.org/10.1038/s41598-019-43973-2 |
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author | Maji, Suman Kumar Yahia, Hussein |
author_facet | Maji, Suman Kumar Yahia, Hussein |
author_sort | Maji, Suman Kumar |
collection | PubMed |
description | The advent of Fluorescence Microscopy over the last few years have dramatically improved the problem of visualization and tracking of specific cellular objects for biological inference. But like any other imaging system, fluorescence microscopy has its own limitations. The resultant images suffer from the effect of noise due to both signal dependent and signal independent factors, thereby limiting the possibility of biological inferencing. Denoising is a class of image processing algorithms that aim to remove noise from acquired images and has gained wide attention in the field of fluorescence microscopy image restoration. In this paper, we propose an image denoising algorithm based on the concept of feature extraction through multifractal decomposition and then estimate a noise free image from the gradients restricted to these features. Experimental results over simulated and real fluorescence microscopy data prove the merit of the proposed approach, both visually and quantitatively. |
format | Online Article Text |
id | pubmed-6531475 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65314752019-05-30 A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising Maji, Suman Kumar Yahia, Hussein Sci Rep Article The advent of Fluorescence Microscopy over the last few years have dramatically improved the problem of visualization and tracking of specific cellular objects for biological inference. But like any other imaging system, fluorescence microscopy has its own limitations. The resultant images suffer from the effect of noise due to both signal dependent and signal independent factors, thereby limiting the possibility of biological inferencing. Denoising is a class of image processing algorithms that aim to remove noise from acquired images and has gained wide attention in the field of fluorescence microscopy image restoration. In this paper, we propose an image denoising algorithm based on the concept of feature extraction through multifractal decomposition and then estimate a noise free image from the gradients restricted to these features. Experimental results over simulated and real fluorescence microscopy data prove the merit of the proposed approach, both visually and quantitatively. Nature Publishing Group UK 2019-05-22 /pmc/articles/PMC6531475/ /pubmed/31118450 http://dx.doi.org/10.1038/s41598-019-43973-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Maji, Suman Kumar Yahia, Hussein A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising |
title | A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising |
title_full | A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising |
title_fullStr | A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising |
title_full_unstemmed | A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising |
title_short | A Feature based Reconstruction Model for Fluorescence Microscopy Image Denoising |
title_sort | feature based reconstruction model for fluorescence microscopy image denoising |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6531475/ https://www.ncbi.nlm.nih.gov/pubmed/31118450 http://dx.doi.org/10.1038/s41598-019-43973-2 |
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