Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India

The whole-genome sequence of an Indian field isolate of classical swine fever virus, NIVEDI-165, was found to be subtype 1.1, and it showed 89 to 99% amino acid identity and 84 to 99% nucleotide identity with four and five Indian classical swine fever virus (CSFV) isolates, respectively. To the best...

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Autores principales: Patil, S. S., Suresh, K. P., Amachawadi, R. G., Meekins, David A., Richt, J. A., Mondal, Mainak, Hiremath, J., Hemadri, D., Rahman, H., Roy, Parimal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6533384/
https://www.ncbi.nlm.nih.gov/pubmed/31123014
http://dx.doi.org/10.1128/MRA.00295-19
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author Patil, S. S.
Suresh, K. P.
Amachawadi, R. G.
Meekins, David A.
Richt, J. A.
Mondal, Mainak
Hiremath, J.
Hemadri, D.
Rahman, H.
Roy, Parimal
author_facet Patil, S. S.
Suresh, K. P.
Amachawadi, R. G.
Meekins, David A.
Richt, J. A.
Mondal, Mainak
Hiremath, J.
Hemadri, D.
Rahman, H.
Roy, Parimal
author_sort Patil, S. S.
collection PubMed
description The whole-genome sequence of an Indian field isolate of classical swine fever virus, NIVEDI-165, was found to be subtype 1.1, and it showed 89 to 99% amino acid identity and 84 to 99% nucleotide identity with four and five Indian classical swine fever virus (CSFV) isolates, respectively. To the best of our knowledge, this is the first report on a full-genome sequence of CSFV from South India.
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spelling pubmed-65333842019-05-28 Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India Patil, S. S. Suresh, K. P. Amachawadi, R. G. Meekins, David A. Richt, J. A. Mondal, Mainak Hiremath, J. Hemadri, D. Rahman, H. Roy, Parimal Microbiol Resour Announc Genome Sequences The whole-genome sequence of an Indian field isolate of classical swine fever virus, NIVEDI-165, was found to be subtype 1.1, and it showed 89 to 99% amino acid identity and 84 to 99% nucleotide identity with four and five Indian classical swine fever virus (CSFV) isolates, respectively. To the best of our knowledge, this is the first report on a full-genome sequence of CSFV from South India. American Society for Microbiology 2019-05-23 /pmc/articles/PMC6533384/ /pubmed/31123014 http://dx.doi.org/10.1128/MRA.00295-19 Text en Copyright © 2019 Patil et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Patil, S. S.
Suresh, K. P.
Amachawadi, R. G.
Meekins, David A.
Richt, J. A.
Mondal, Mainak
Hiremath, J.
Hemadri, D.
Rahman, H.
Roy, Parimal
Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India
title Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India
title_full Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India
title_fullStr Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India
title_full_unstemmed Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India
title_short Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India
title_sort genome sequence of classical swine fever virus nivedi-165, subtype 1.1, a field virus strain isolated from the southern part of india
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6533384/
https://www.ncbi.nlm.nih.gov/pubmed/31123014
http://dx.doi.org/10.1128/MRA.00295-19
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