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Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
In recent years, the field of immunology has been revolutionized by the growing understanding of the fundamental role of microbiota in the immune system function. The immune system has evolved to maintain a symbiotic relationship with these microbes. The aim of our study was to know in depth the unc...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6536642/ https://www.ncbi.nlm.nih.gov/pubmed/31164869 http://dx.doi.org/10.3389/fmicb.2019.00965 |
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author | Belforte, Fiorella Sabrina Fernandez, Natalie Tonín Monzón, Francisco Rosso, Ayelén Daiana Quesada, Sofía Cimolai, María Cecilia Millán, Andrea Cerrone, Gloria Edith Frechtel, Gustavo Daniel Burcelin, Rémy Coluccio Leskow, Federico Penas-Steinhardt, Alberto |
author_facet | Belforte, Fiorella Sabrina Fernandez, Natalie Tonín Monzón, Francisco Rosso, Ayelén Daiana Quesada, Sofía Cimolai, María Cecilia Millán, Andrea Cerrone, Gloria Edith Frechtel, Gustavo Daniel Burcelin, Rémy Coluccio Leskow, Federico Penas-Steinhardt, Alberto |
author_sort | Belforte, Fiorella Sabrina |
collection | PubMed |
description | In recent years, the field of immunology has been revolutionized by the growing understanding of the fundamental role of microbiota in the immune system function. The immune system has evolved to maintain a symbiotic relationship with these microbes. The aim of our study was to know in depth the uncharacterized metagenome of the Buenos Aires (BA) city population and its metropolitan area, being the second most populated agglomeration in the southern hemisphere. For this purpose, we evaluated 30 individuals (age: 35.23 ± 8.26 years and BMI: 23.91 ± 3.4 kg/m(2)), from the general population of BA. The hypervariable regions V3-V4 of the bacterial 16S gene was sequenced by MiSeq-Illumina system, obtaining 47526 ± 4718 sequences/sample. The dominant phyla were Bacteroidetes, Firmicutes, Proteobacteria, Verrucomicrobia, and Actinobacteria. Additionally, we compared the microbiota of BA with other westernized populations (Santiago de Chile, Rosario-Argentina, United States-Human-microbiome-project, Bologna-Italy) and the Hadza population of hunter-gatherers. The unweighted UniFrac clustered together all westernized populations, leaving the hunter-gatherer population from Hadza out. In particular, Santiago de Chile’s population turns out to be the closest to BA’s, principally due to the presence of Verrucomicrobiales of the genus Akkermansia. These microorganisms have been proposed as a hallmark of a healthy gut. Finally, westernized populations showed more abundant metabolism related KEEG pathways than hunter-gatherers, including carbohydrate metabolism (amino sugar and nucleotide sugar metabolism), amino acid metabolism (alanine, aspartate and glutamate metabolism), lipid metabolism, biosynthesis of secondary metabolites, and sulfur metabolism. These findings contribute to promote research and comparison of the microbiome in different human populations, in order to develop more efficient therapeutic strategies for the restoration of a healthy dialogue between host and environment. |
format | Online Article Text |
id | pubmed-6536642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65366422019-06-04 Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants Belforte, Fiorella Sabrina Fernandez, Natalie Tonín Monzón, Francisco Rosso, Ayelén Daiana Quesada, Sofía Cimolai, María Cecilia Millán, Andrea Cerrone, Gloria Edith Frechtel, Gustavo Daniel Burcelin, Rémy Coluccio Leskow, Federico Penas-Steinhardt, Alberto Front Microbiol Microbiology In recent years, the field of immunology has been revolutionized by the growing understanding of the fundamental role of microbiota in the immune system function. The immune system has evolved to maintain a symbiotic relationship with these microbes. The aim of our study was to know in depth the uncharacterized metagenome of the Buenos Aires (BA) city population and its metropolitan area, being the second most populated agglomeration in the southern hemisphere. For this purpose, we evaluated 30 individuals (age: 35.23 ± 8.26 years and BMI: 23.91 ± 3.4 kg/m(2)), from the general population of BA. The hypervariable regions V3-V4 of the bacterial 16S gene was sequenced by MiSeq-Illumina system, obtaining 47526 ± 4718 sequences/sample. The dominant phyla were Bacteroidetes, Firmicutes, Proteobacteria, Verrucomicrobia, and Actinobacteria. Additionally, we compared the microbiota of BA with other westernized populations (Santiago de Chile, Rosario-Argentina, United States-Human-microbiome-project, Bologna-Italy) and the Hadza population of hunter-gatherers. The unweighted UniFrac clustered together all westernized populations, leaving the hunter-gatherer population from Hadza out. In particular, Santiago de Chile’s population turns out to be the closest to BA’s, principally due to the presence of Verrucomicrobiales of the genus Akkermansia. These microorganisms have been proposed as a hallmark of a healthy gut. Finally, westernized populations showed more abundant metabolism related KEEG pathways than hunter-gatherers, including carbohydrate metabolism (amino sugar and nucleotide sugar metabolism), amino acid metabolism (alanine, aspartate and glutamate metabolism), lipid metabolism, biosynthesis of secondary metabolites, and sulfur metabolism. These findings contribute to promote research and comparison of the microbiome in different human populations, in order to develop more efficient therapeutic strategies for the restoration of a healthy dialogue between host and environment. Frontiers Media S.A. 2019-05-21 /pmc/articles/PMC6536642/ /pubmed/31164869 http://dx.doi.org/10.3389/fmicb.2019.00965 Text en Copyright © 2019 Belforte, Fernandez, Tonín Monzón, Rosso, Quesada, Cimolai, Millán, Cerrone, Frechtel, Burcelin, Coluccio Leskow and Penas-Steinhardt. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Belforte, Fiorella Sabrina Fernandez, Natalie Tonín Monzón, Francisco Rosso, Ayelén Daiana Quesada, Sofía Cimolai, María Cecilia Millán, Andrea Cerrone, Gloria Edith Frechtel, Gustavo Daniel Burcelin, Rémy Coluccio Leskow, Federico Penas-Steinhardt, Alberto Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants |
title | Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants |
title_full | Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants |
title_fullStr | Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants |
title_full_unstemmed | Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants |
title_short | Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants |
title_sort | getting to know the gut microbial diversity of metropolitan buenos aires inhabitants |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6536642/ https://www.ncbi.nlm.nih.gov/pubmed/31164869 http://dx.doi.org/10.3389/fmicb.2019.00965 |
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