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Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants

In recent years, the field of immunology has been revolutionized by the growing understanding of the fundamental role of microbiota in the immune system function. The immune system has evolved to maintain a symbiotic relationship with these microbes. The aim of our study was to know in depth the unc...

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Autores principales: Belforte, Fiorella Sabrina, Fernandez, Natalie, Tonín Monzón, Francisco, Rosso, Ayelén Daiana, Quesada, Sofía, Cimolai, María Cecilia, Millán, Andrea, Cerrone, Gloria Edith, Frechtel, Gustavo Daniel, Burcelin, Rémy, Coluccio Leskow, Federico, Penas-Steinhardt, Alberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6536642/
https://www.ncbi.nlm.nih.gov/pubmed/31164869
http://dx.doi.org/10.3389/fmicb.2019.00965
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author Belforte, Fiorella Sabrina
Fernandez, Natalie
Tonín Monzón, Francisco
Rosso, Ayelén Daiana
Quesada, Sofía
Cimolai, María Cecilia
Millán, Andrea
Cerrone, Gloria Edith
Frechtel, Gustavo Daniel
Burcelin, Rémy
Coluccio Leskow, Federico
Penas-Steinhardt, Alberto
author_facet Belforte, Fiorella Sabrina
Fernandez, Natalie
Tonín Monzón, Francisco
Rosso, Ayelén Daiana
Quesada, Sofía
Cimolai, María Cecilia
Millán, Andrea
Cerrone, Gloria Edith
Frechtel, Gustavo Daniel
Burcelin, Rémy
Coluccio Leskow, Federico
Penas-Steinhardt, Alberto
author_sort Belforte, Fiorella Sabrina
collection PubMed
description In recent years, the field of immunology has been revolutionized by the growing understanding of the fundamental role of microbiota in the immune system function. The immune system has evolved to maintain a symbiotic relationship with these microbes. The aim of our study was to know in depth the uncharacterized metagenome of the Buenos Aires (BA) city population and its metropolitan area, being the second most populated agglomeration in the southern hemisphere. For this purpose, we evaluated 30 individuals (age: 35.23 ± 8.26 years and BMI: 23.91 ± 3.4 kg/m(2)), from the general population of BA. The hypervariable regions V3-V4 of the bacterial 16S gene was sequenced by MiSeq-Illumina system, obtaining 47526 ± 4718 sequences/sample. The dominant phyla were Bacteroidetes, Firmicutes, Proteobacteria, Verrucomicrobia, and Actinobacteria. Additionally, we compared the microbiota of BA with other westernized populations (Santiago de Chile, Rosario-Argentina, United States-Human-microbiome-project, Bologna-Italy) and the Hadza population of hunter-gatherers. The unweighted UniFrac clustered together all westernized populations, leaving the hunter-gatherer population from Hadza out. In particular, Santiago de Chile’s population turns out to be the closest to BA’s, principally due to the presence of Verrucomicrobiales of the genus Akkermansia. These microorganisms have been proposed as a hallmark of a healthy gut. Finally, westernized populations showed more abundant metabolism related KEEG pathways than hunter-gatherers, including carbohydrate metabolism (amino sugar and nucleotide sugar metabolism), amino acid metabolism (alanine, aspartate and glutamate metabolism), lipid metabolism, biosynthesis of secondary metabolites, and sulfur metabolism. These findings contribute to promote research and comparison of the microbiome in different human populations, in order to develop more efficient therapeutic strategies for the restoration of a healthy dialogue between host and environment.
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spelling pubmed-65366422019-06-04 Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants Belforte, Fiorella Sabrina Fernandez, Natalie Tonín Monzón, Francisco Rosso, Ayelén Daiana Quesada, Sofía Cimolai, María Cecilia Millán, Andrea Cerrone, Gloria Edith Frechtel, Gustavo Daniel Burcelin, Rémy Coluccio Leskow, Federico Penas-Steinhardt, Alberto Front Microbiol Microbiology In recent years, the field of immunology has been revolutionized by the growing understanding of the fundamental role of microbiota in the immune system function. The immune system has evolved to maintain a symbiotic relationship with these microbes. The aim of our study was to know in depth the uncharacterized metagenome of the Buenos Aires (BA) city population and its metropolitan area, being the second most populated agglomeration in the southern hemisphere. For this purpose, we evaluated 30 individuals (age: 35.23 ± 8.26 years and BMI: 23.91 ± 3.4 kg/m(2)), from the general population of BA. The hypervariable regions V3-V4 of the bacterial 16S gene was sequenced by MiSeq-Illumina system, obtaining 47526 ± 4718 sequences/sample. The dominant phyla were Bacteroidetes, Firmicutes, Proteobacteria, Verrucomicrobia, and Actinobacteria. Additionally, we compared the microbiota of BA with other westernized populations (Santiago de Chile, Rosario-Argentina, United States-Human-microbiome-project, Bologna-Italy) and the Hadza population of hunter-gatherers. The unweighted UniFrac clustered together all westernized populations, leaving the hunter-gatherer population from Hadza out. In particular, Santiago de Chile’s population turns out to be the closest to BA’s, principally due to the presence of Verrucomicrobiales of the genus Akkermansia. These microorganisms have been proposed as a hallmark of a healthy gut. Finally, westernized populations showed more abundant metabolism related KEEG pathways than hunter-gatherers, including carbohydrate metabolism (amino sugar and nucleotide sugar metabolism), amino acid metabolism (alanine, aspartate and glutamate metabolism), lipid metabolism, biosynthesis of secondary metabolites, and sulfur metabolism. These findings contribute to promote research and comparison of the microbiome in different human populations, in order to develop more efficient therapeutic strategies for the restoration of a healthy dialogue between host and environment. Frontiers Media S.A. 2019-05-21 /pmc/articles/PMC6536642/ /pubmed/31164869 http://dx.doi.org/10.3389/fmicb.2019.00965 Text en Copyright © 2019 Belforte, Fernandez, Tonín Monzón, Rosso, Quesada, Cimolai, Millán, Cerrone, Frechtel, Burcelin, Coluccio Leskow and Penas-Steinhardt. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Belforte, Fiorella Sabrina
Fernandez, Natalie
Tonín Monzón, Francisco
Rosso, Ayelén Daiana
Quesada, Sofía
Cimolai, María Cecilia
Millán, Andrea
Cerrone, Gloria Edith
Frechtel, Gustavo Daniel
Burcelin, Rémy
Coluccio Leskow, Federico
Penas-Steinhardt, Alberto
Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
title Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
title_full Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
title_fullStr Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
title_full_unstemmed Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
title_short Getting to Know the Gut Microbial Diversity of Metropolitan Buenos Aires Inhabitants
title_sort getting to know the gut microbial diversity of metropolitan buenos aires inhabitants
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6536642/
https://www.ncbi.nlm.nih.gov/pubmed/31164869
http://dx.doi.org/10.3389/fmicb.2019.00965
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