Cargando…

A Comprehensive Bioinformatics Analysis of UBE2C in Cancers

Ubiquitination is one of the main post-translational modification of proteins. It plays key roles in a broad range of cellular functions, including protein degradation, protein interactions, and subcellular location. In the ubiquitination system, different proteins are involved and their dysregulati...

Descripción completa

Detalles Bibliográficos
Autores principales: Dastsooz, Hassan, Cereda, Matteo, Donna, Daniela, Oliviero, Salvatore
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6539744/
https://www.ncbi.nlm.nih.gov/pubmed/31067633
http://dx.doi.org/10.3390/ijms20092228
_version_ 1783422461291790336
author Dastsooz, Hassan
Cereda, Matteo
Donna, Daniela
Oliviero, Salvatore
author_facet Dastsooz, Hassan
Cereda, Matteo
Donna, Daniela
Oliviero, Salvatore
author_sort Dastsooz, Hassan
collection PubMed
description Ubiquitination is one of the main post-translational modification of proteins. It plays key roles in a broad range of cellular functions, including protein degradation, protein interactions, and subcellular location. In the ubiquitination system, different proteins are involved and their dysregulation can lead to various human diseases, including cancers. By using data available from the Cancer Genome Atlas (TCGA) and the Genotype-Tissue Expression (GTEx) databases, we here show that the ubiquitin conjugating enzyme, E2C (UBE2C), is overexpressed in all 27 cancers we investigated. UBE2C expression is significantly higher in late-stage tumors, which might indicate its involvement in tumor progression and invasion. This study also revealed that patients with higher UBE2C levels showed a shorter overall survival (OS) time and worse OS prognosis. Moreover, our data show that UBE2C higher-expression leads to worse disease-free survival prognosis (DFS), indicating that UBE2C overexpression correlates with poor clinical outcomes. We also identified genes with positive correlations with UBE2C in several cancers. We found a number of poorly studied genes (family with sequence similarity 72-member D, FAM72D; meiotic nuclear divisions 1, MND1; mitochondrial fission regulator 2, MTFR2; and POC1 centriolar protein A, POC1A) whose expression correlates with UBE2C. These genes might be considered as new targets for cancers therapies since they showed overexpression in several cancers and correlate with worse OS prognosis.
format Online
Article
Text
id pubmed-6539744
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-65397442019-06-04 A Comprehensive Bioinformatics Analysis of UBE2C in Cancers Dastsooz, Hassan Cereda, Matteo Donna, Daniela Oliviero, Salvatore Int J Mol Sci Article Ubiquitination is one of the main post-translational modification of proteins. It plays key roles in a broad range of cellular functions, including protein degradation, protein interactions, and subcellular location. In the ubiquitination system, different proteins are involved and their dysregulation can lead to various human diseases, including cancers. By using data available from the Cancer Genome Atlas (TCGA) and the Genotype-Tissue Expression (GTEx) databases, we here show that the ubiquitin conjugating enzyme, E2C (UBE2C), is overexpressed in all 27 cancers we investigated. UBE2C expression is significantly higher in late-stage tumors, which might indicate its involvement in tumor progression and invasion. This study also revealed that patients with higher UBE2C levels showed a shorter overall survival (OS) time and worse OS prognosis. Moreover, our data show that UBE2C higher-expression leads to worse disease-free survival prognosis (DFS), indicating that UBE2C overexpression correlates with poor clinical outcomes. We also identified genes with positive correlations with UBE2C in several cancers. We found a number of poorly studied genes (family with sequence similarity 72-member D, FAM72D; meiotic nuclear divisions 1, MND1; mitochondrial fission regulator 2, MTFR2; and POC1 centriolar protein A, POC1A) whose expression correlates with UBE2C. These genes might be considered as new targets for cancers therapies since they showed overexpression in several cancers and correlate with worse OS prognosis. MDPI 2019-05-07 /pmc/articles/PMC6539744/ /pubmed/31067633 http://dx.doi.org/10.3390/ijms20092228 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dastsooz, Hassan
Cereda, Matteo
Donna, Daniela
Oliviero, Salvatore
A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
title A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
title_full A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
title_fullStr A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
title_full_unstemmed A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
title_short A Comprehensive Bioinformatics Analysis of UBE2C in Cancers
title_sort comprehensive bioinformatics analysis of ube2c in cancers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6539744/
https://www.ncbi.nlm.nih.gov/pubmed/31067633
http://dx.doi.org/10.3390/ijms20092228
work_keys_str_mv AT dastsoozhassan acomprehensivebioinformaticsanalysisofube2cincancers
AT ceredamatteo acomprehensivebioinformaticsanalysisofube2cincancers
AT donnadaniela acomprehensivebioinformaticsanalysisofube2cincancers
AT olivierosalvatore acomprehensivebioinformaticsanalysisofube2cincancers
AT dastsoozhassan comprehensivebioinformaticsanalysisofube2cincancers
AT ceredamatteo comprehensivebioinformaticsanalysisofube2cincancers
AT donnadaniela comprehensivebioinformaticsanalysisofube2cincancers
AT olivierosalvatore comprehensivebioinformaticsanalysisofube2cincancers