Cargando…

Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation

Embryo implantation in the mink follows the pattern of many carnivores, in that preimplantation embryo diapause occurs in every gestation. Details of the gene expression and regulatory networks that terminate embryo diapause remain poorly understood. Illumina RNA-Seq was used to analyze global gene...

Descripción completa

Detalles Bibliográficos
Autores principales: Cao, Xinyan, Zhao, Jiaping, Liu, Yong, Ba, Hengxing, Wei, Haijun, Zhang, Yufei, Wang, Guiwu, Murphy, Bruce D., Xing, Xiumei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540205/
https://www.ncbi.nlm.nih.gov/pubmed/31035421
http://dx.doi.org/10.3390/ijms20092099
_version_ 1783422567368884224
author Cao, Xinyan
Zhao, Jiaping
Liu, Yong
Ba, Hengxing
Wei, Haijun
Zhang, Yufei
Wang, Guiwu
Murphy, Bruce D.
Xing, Xiumei
author_facet Cao, Xinyan
Zhao, Jiaping
Liu, Yong
Ba, Hengxing
Wei, Haijun
Zhang, Yufei
Wang, Guiwu
Murphy, Bruce D.
Xing, Xiumei
author_sort Cao, Xinyan
collection PubMed
description Embryo implantation in the mink follows the pattern of many carnivores, in that preimplantation embryo diapause occurs in every gestation. Details of the gene expression and regulatory networks that terminate embryo diapause remain poorly understood. Illumina RNA-Seq was used to analyze global gene expression changes in the mink uterus during embryo diapause and activation leading to implantation. More than 50 million high quality reads were generated, and assembled into 170,984 unigenes. A total of 1684 differential expressed genes (DEGs) in uteri with blastocysts in diapause were compared to the activated embryo group (p < 0.05). Among these transcripts, 1527 were annotated as known genes, including 963 up-regulated and 564 down-regulated genes. The gene ontology terms for the observed DEGs, included cellular communication, phosphatase activity, extracellular matrix and G-protein couple receptor activity. The KEGG pathways, including PI3K-Akt signaling pathway, focal adhesion and extracellular matrix (ECM)-receptor interactions were the most enriched. A protein-protein interaction (PPI) network was constructed, and hub nodes such as VEGFA, EGF, AKT, IGF1, PIK3C and CCND1 with high degrees of connectivity represent gene clusters expected to play an important role in embryo activation. These results provide novel information for understanding the molecular mechanisms of maternal regulation of embryo activation in mink.
format Online
Article
Text
id pubmed-6540205
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-65402052019-06-04 Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation Cao, Xinyan Zhao, Jiaping Liu, Yong Ba, Hengxing Wei, Haijun Zhang, Yufei Wang, Guiwu Murphy, Bruce D. Xing, Xiumei Int J Mol Sci Article Embryo implantation in the mink follows the pattern of many carnivores, in that preimplantation embryo diapause occurs in every gestation. Details of the gene expression and regulatory networks that terminate embryo diapause remain poorly understood. Illumina RNA-Seq was used to analyze global gene expression changes in the mink uterus during embryo diapause and activation leading to implantation. More than 50 million high quality reads were generated, and assembled into 170,984 unigenes. A total of 1684 differential expressed genes (DEGs) in uteri with blastocysts in diapause were compared to the activated embryo group (p < 0.05). Among these transcripts, 1527 were annotated as known genes, including 963 up-regulated and 564 down-regulated genes. The gene ontology terms for the observed DEGs, included cellular communication, phosphatase activity, extracellular matrix and G-protein couple receptor activity. The KEGG pathways, including PI3K-Akt signaling pathway, focal adhesion and extracellular matrix (ECM)-receptor interactions were the most enriched. A protein-protein interaction (PPI) network was constructed, and hub nodes such as VEGFA, EGF, AKT, IGF1, PIK3C and CCND1 with high degrees of connectivity represent gene clusters expected to play an important role in embryo activation. These results provide novel information for understanding the molecular mechanisms of maternal regulation of embryo activation in mink. MDPI 2019-04-28 /pmc/articles/PMC6540205/ /pubmed/31035421 http://dx.doi.org/10.3390/ijms20092099 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cao, Xinyan
Zhao, Jiaping
Liu, Yong
Ba, Hengxing
Wei, Haijun
Zhang, Yufei
Wang, Guiwu
Murphy, Bruce D.
Xing, Xiumei
Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation
title Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation
title_full Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation
title_fullStr Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation
title_full_unstemmed Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation
title_short Transcriptome Changes in the Mink Uterus during Blastocyst Dormancy and Reactivation
title_sort transcriptome changes in the mink uterus during blastocyst dormancy and reactivation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540205/
https://www.ncbi.nlm.nih.gov/pubmed/31035421
http://dx.doi.org/10.3390/ijms20092099
work_keys_str_mv AT caoxinyan transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT zhaojiaping transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT liuyong transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT bahengxing transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT weihaijun transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT zhangyufei transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT wangguiwu transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT murphybruced transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation
AT xingxiumei transcriptomechangesintheminkuterusduringblastocystdormancyandreactivation