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DNA methylation status of TBX20 in patients with tetralogy of Fallot
BACKGROUND: TBX20 plays an important role in heart development; however, its epigenetic regulation in the pathogenesis of tetralogy of Fallot (TOF) remains unclear. METHODS: The methylation levels of the TBX20 promoter region in the right ventricular myocardial tissues of TOF and control samples wer...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540552/ https://www.ncbi.nlm.nih.gov/pubmed/31138201 http://dx.doi.org/10.1186/s12920-019-0534-3 |
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author | Gong, Juan Sheng, Wei Ma, Duan Huang, Guoying Liu, Fang |
author_facet | Gong, Juan Sheng, Wei Ma, Duan Huang, Guoying Liu, Fang |
author_sort | Gong, Juan |
collection | PubMed |
description | BACKGROUND: TBX20 plays an important role in heart development; however, its epigenetic regulation in the pathogenesis of tetralogy of Fallot (TOF) remains unclear. METHODS: The methylation levels of the TBX20 promoter region in the right ventricular myocardial tissues of TOF and control samples were measured by the Sequenom MassARRAY platform. Bisulphite-sequencing PCR (BSP) was used to confirm the TBX20 methylation of CpG sites in cells. Dual-luciferase reporter assays were performed to detect the influence of TBX20 methylation and Sp1 transcription factors on gene activity. An electrophoretic mobility shift assay (EMSA) was used to explore the binding of the Sp1 transcription factor to the TBX20 promoter. RESULTS: TOF cases had a significantly lower TBX20_M1 methylation level than controls (median methylation: 20.40% vs. 38.73%; p = 0.0047). The Sp1 transcription factor, which binds to Sp1 binding sites in the TBX20_M1 region and promotes TBX20 gene activity, was blocked by the methylation of Sp1 binding sites in normal controls. With decreasing methylation in the TOF cases, the Sp1 transcription factor can bind to its binding site within the TBX20 promoter M1 region and promote TBX20 gene expression. CONCLUSIONS: Hypomethylation of the TBX20 promoter region was observed in the TOF cases, and the high expression of the TBX20 gene may be caused by activated Sp1 transcription factor binding because of the decreasing methylation at the Sp1 transcription factor binding sites within TBX20_M1. |
format | Online Article Text |
id | pubmed-6540552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-65405522019-06-03 DNA methylation status of TBX20 in patients with tetralogy of Fallot Gong, Juan Sheng, Wei Ma, Duan Huang, Guoying Liu, Fang BMC Med Genomics Research Article BACKGROUND: TBX20 plays an important role in heart development; however, its epigenetic regulation in the pathogenesis of tetralogy of Fallot (TOF) remains unclear. METHODS: The methylation levels of the TBX20 promoter region in the right ventricular myocardial tissues of TOF and control samples were measured by the Sequenom MassARRAY platform. Bisulphite-sequencing PCR (BSP) was used to confirm the TBX20 methylation of CpG sites in cells. Dual-luciferase reporter assays were performed to detect the influence of TBX20 methylation and Sp1 transcription factors on gene activity. An electrophoretic mobility shift assay (EMSA) was used to explore the binding of the Sp1 transcription factor to the TBX20 promoter. RESULTS: TOF cases had a significantly lower TBX20_M1 methylation level than controls (median methylation: 20.40% vs. 38.73%; p = 0.0047). The Sp1 transcription factor, which binds to Sp1 binding sites in the TBX20_M1 region and promotes TBX20 gene activity, was blocked by the methylation of Sp1 binding sites in normal controls. With decreasing methylation in the TOF cases, the Sp1 transcription factor can bind to its binding site within the TBX20 promoter M1 region and promote TBX20 gene expression. CONCLUSIONS: Hypomethylation of the TBX20 promoter region was observed in the TOF cases, and the high expression of the TBX20 gene may be caused by activated Sp1 transcription factor binding because of the decreasing methylation at the Sp1 transcription factor binding sites within TBX20_M1. BioMed Central 2019-05-28 /pmc/articles/PMC6540552/ /pubmed/31138201 http://dx.doi.org/10.1186/s12920-019-0534-3 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Gong, Juan Sheng, Wei Ma, Duan Huang, Guoying Liu, Fang DNA methylation status of TBX20 in patients with tetralogy of Fallot |
title | DNA methylation status of TBX20 in patients with tetralogy of Fallot |
title_full | DNA methylation status of TBX20 in patients with tetralogy of Fallot |
title_fullStr | DNA methylation status of TBX20 in patients with tetralogy of Fallot |
title_full_unstemmed | DNA methylation status of TBX20 in patients with tetralogy of Fallot |
title_short | DNA methylation status of TBX20 in patients with tetralogy of Fallot |
title_sort | dna methylation status of tbx20 in patients with tetralogy of fallot |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540552/ https://www.ncbi.nlm.nih.gov/pubmed/31138201 http://dx.doi.org/10.1186/s12920-019-0534-3 |
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