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Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier

Population genetics has been increasingly applied to study large sharks over the last decade. Whilst large shark species are often difficult to study with direct methods, improved knowledge is needed for both population management and conservation, especially for species vulnerable to anthropogenic...

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Autores principales: Pirog, Agathe, Jaquemet, Sébastien, Ravigné, Virginie, Cliff, Geremy, Clua, Eric, Holmes, Bonnie J., Hussey, Nigel E., Nevill, John E. G., Temple, Andrew J., Berggren, Per, Vigliola, Laurent, Magalon, Hélène
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540675/
https://www.ncbi.nlm.nih.gov/pubmed/31160982
http://dx.doi.org/10.1002/ece3.5111
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author Pirog, Agathe
Jaquemet, Sébastien
Ravigné, Virginie
Cliff, Geremy
Clua, Eric
Holmes, Bonnie J.
Hussey, Nigel E.
Nevill, John E. G.
Temple, Andrew J.
Berggren, Per
Vigliola, Laurent
Magalon, Hélène
author_facet Pirog, Agathe
Jaquemet, Sébastien
Ravigné, Virginie
Cliff, Geremy
Clua, Eric
Holmes, Bonnie J.
Hussey, Nigel E.
Nevill, John E. G.
Temple, Andrew J.
Berggren, Per
Vigliola, Laurent
Magalon, Hélène
author_sort Pirog, Agathe
collection PubMed
description Population genetics has been increasingly applied to study large sharks over the last decade. Whilst large shark species are often difficult to study with direct methods, improved knowledge is needed for both population management and conservation, especially for species vulnerable to anthropogenic and climatic impacts. The tiger shark, Galeocerdo cuvier, is an apex predator known to play important direct and indirect roles in tropical and subtropical marine ecosystems. While the global and Indo‐West Pacific population genetic structure of this species has recently been investigated, questions remain over population structure and demographic history within the western Indian (WIO) and within the western Pacific Oceans (WPO). To address the knowledge gap in tiger shark regional population structures, the genetic diversity of 286 individuals sampled in seven localities was investigated using 27 microsatellite loci and three mitochondrial genes (CR,COI, and cytb). A weak genetic differentiation was observed between the WIO and the WPO, suggesting high genetic connectivity. This result agrees with previous studies and highlights the importance of the pelagic behavior of this species to ensure gene flow. Using approximate Bayesian computation to couple information from both nuclear and mitochondrial markers, evidence of a recent bottleneck in the Holocene (2,000–3,000 years ago) was found, which is the most probable cause for the low genetic diversity observed. A contemporary effective population size as low as 111 [43,369] was estimated during the bottleneck. Together, these results indicate low genetic diversity that may reflect a vulnerable population sensitive to regional pressures. Conservation measures are thus needed to protect a species that is classified as Near Threatened.
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spelling pubmed-65406752019-06-03 Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier Pirog, Agathe Jaquemet, Sébastien Ravigné, Virginie Cliff, Geremy Clua, Eric Holmes, Bonnie J. Hussey, Nigel E. Nevill, John E. G. Temple, Andrew J. Berggren, Per Vigliola, Laurent Magalon, Hélène Ecol Evol Original Research Population genetics has been increasingly applied to study large sharks over the last decade. Whilst large shark species are often difficult to study with direct methods, improved knowledge is needed for both population management and conservation, especially for species vulnerable to anthropogenic and climatic impacts. The tiger shark, Galeocerdo cuvier, is an apex predator known to play important direct and indirect roles in tropical and subtropical marine ecosystems. While the global and Indo‐West Pacific population genetic structure of this species has recently been investigated, questions remain over population structure and demographic history within the western Indian (WIO) and within the western Pacific Oceans (WPO). To address the knowledge gap in tiger shark regional population structures, the genetic diversity of 286 individuals sampled in seven localities was investigated using 27 microsatellite loci and three mitochondrial genes (CR,COI, and cytb). A weak genetic differentiation was observed between the WIO and the WPO, suggesting high genetic connectivity. This result agrees with previous studies and highlights the importance of the pelagic behavior of this species to ensure gene flow. Using approximate Bayesian computation to couple information from both nuclear and mitochondrial markers, evidence of a recent bottleneck in the Holocene (2,000–3,000 years ago) was found, which is the most probable cause for the low genetic diversity observed. A contemporary effective population size as low as 111 [43,369] was estimated during the bottleneck. Together, these results indicate low genetic diversity that may reflect a vulnerable population sensitive to regional pressures. Conservation measures are thus needed to protect a species that is classified as Near Threatened. John Wiley and Sons Inc. 2019-05-04 /pmc/articles/PMC6540675/ /pubmed/31160982 http://dx.doi.org/10.1002/ece3.5111 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Pirog, Agathe
Jaquemet, Sébastien
Ravigné, Virginie
Cliff, Geremy
Clua, Eric
Holmes, Bonnie J.
Hussey, Nigel E.
Nevill, John E. G.
Temple, Andrew J.
Berggren, Per
Vigliola, Laurent
Magalon, Hélène
Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier
title Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier
title_full Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier
title_fullStr Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier
title_full_unstemmed Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier
title_short Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier
title_sort genetic population structure and demography of an apex predator, the tiger shark galeocerdo cuvier
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540675/
https://www.ncbi.nlm.nih.gov/pubmed/31160982
http://dx.doi.org/10.1002/ece3.5111
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