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Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate

Recent research suggests that the frequency of polyploidy may have been underestimated in gymnosperms. One notable example is in the conifer genus Juniperus, where there are already a few reports of polyploids although data are still missing for most species. In this study, we evaluated the extent o...

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Autores principales: Farhat, Perla, Hidalgo, Oriane, Robert, Thierry, Siljak-Yakovlev, Sonja, Leitch, Ilia J., Adams, Robert P., Bou Dagher-Kharrat, Magda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541006/
https://www.ncbi.nlm.nih.gov/pubmed/31191584
http://dx.doi.org/10.3389/fpls.2019.00676
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author Farhat, Perla
Hidalgo, Oriane
Robert, Thierry
Siljak-Yakovlev, Sonja
Leitch, Ilia J.
Adams, Robert P.
Bou Dagher-Kharrat, Magda
author_facet Farhat, Perla
Hidalgo, Oriane
Robert, Thierry
Siljak-Yakovlev, Sonja
Leitch, Ilia J.
Adams, Robert P.
Bou Dagher-Kharrat, Magda
author_sort Farhat, Perla
collection PubMed
description Recent research suggests that the frequency of polyploidy may have been underestimated in gymnosperms. One notable example is in the conifer genus Juniperus, where there are already a few reports of polyploids although data are still missing for most species. In this study, we evaluated the extent of polyploidy in Juniperus by conducting the first comprehensive screen across nearly all of the genus. Genome size data from fresh material, together with chromosome counts, were used to demonstrate that genome sizes estimated from dried material could be used as reliable proxies to uncover the extent of ploidy diversity across the genus. Our analysis revealed that 16 Juniperus taxa were polyploid, with tetraploids and one hexaploid being reported. Furthermore, by analyzing the genome size and chromosome data within a phylogenetic framework we provide the first evidence of possible lineage-specific polyploidizations within the genus. Genome downsizing following polyploidization is moderate, suggesting limited genome restructuring. This study highlights the importance of polyploidy in Juniperus, making it the first conifer genus and only the second genus in gymnosperms where polyploidy is frequent. In this sense, Juniperus represents an interesting model for investigating the genomic and ecological consequences of polyploidy in conifers.
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spelling pubmed-65410062019-06-12 Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate Farhat, Perla Hidalgo, Oriane Robert, Thierry Siljak-Yakovlev, Sonja Leitch, Ilia J. Adams, Robert P. Bou Dagher-Kharrat, Magda Front Plant Sci Plant Science Recent research suggests that the frequency of polyploidy may have been underestimated in gymnosperms. One notable example is in the conifer genus Juniperus, where there are already a few reports of polyploids although data are still missing for most species. In this study, we evaluated the extent of polyploidy in Juniperus by conducting the first comprehensive screen across nearly all of the genus. Genome size data from fresh material, together with chromosome counts, were used to demonstrate that genome sizes estimated from dried material could be used as reliable proxies to uncover the extent of ploidy diversity across the genus. Our analysis revealed that 16 Juniperus taxa were polyploid, with tetraploids and one hexaploid being reported. Furthermore, by analyzing the genome size and chromosome data within a phylogenetic framework we provide the first evidence of possible lineage-specific polyploidizations within the genus. Genome downsizing following polyploidization is moderate, suggesting limited genome restructuring. This study highlights the importance of polyploidy in Juniperus, making it the first conifer genus and only the second genus in gymnosperms where polyploidy is frequent. In this sense, Juniperus represents an interesting model for investigating the genomic and ecological consequences of polyploidy in conifers. Frontiers Media S.A. 2019-05-22 /pmc/articles/PMC6541006/ /pubmed/31191584 http://dx.doi.org/10.3389/fpls.2019.00676 Text en Copyright © 2019 Farhat, Hidalgo, Robert, Siljak-Yakovlev, Leitch, Adams and Bou Dagher-Kharrat. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Farhat, Perla
Hidalgo, Oriane
Robert, Thierry
Siljak-Yakovlev, Sonja
Leitch, Ilia J.
Adams, Robert P.
Bou Dagher-Kharrat, Magda
Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate
title Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate
title_full Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate
title_fullStr Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate
title_full_unstemmed Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate
title_short Polyploidy in the Conifer Genus Juniperus: An Unexpectedly High Rate
title_sort polyploidy in the conifer genus juniperus: an unexpectedly high rate
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541006/
https://www.ncbi.nlm.nih.gov/pubmed/31191584
http://dx.doi.org/10.3389/fpls.2019.00676
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