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A Simplified Crossing Fiber Model in Diffusion Weighted Imaging
Diffusion MRI (dMRI) is a vital source of imaging data for identifying anatomical connections in the living human brain that form the substrate for information transfer between brain regions. dMRI can thus play a central role toward our understanding of brain function. The quantitative modeling and...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541109/ https://www.ncbi.nlm.nih.gov/pubmed/31191215 http://dx.doi.org/10.3389/fnins.2019.00492 |
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author | Yang, Sheng Ghosh, Kaushik Sakaie, Ken Sahoo, Satya S. Carr, Sarah J. Ann Tatsuoka, Curtis |
author_facet | Yang, Sheng Ghosh, Kaushik Sakaie, Ken Sahoo, Satya S. Carr, Sarah J. Ann Tatsuoka, Curtis |
author_sort | Yang, Sheng |
collection | PubMed |
description | Diffusion MRI (dMRI) is a vital source of imaging data for identifying anatomical connections in the living human brain that form the substrate for information transfer between brain regions. dMRI can thus play a central role toward our understanding of brain function. The quantitative modeling and analysis of dMRI data deduces the features of neural fibers at the voxel level, such as direction and density. The modeling methods that have been developed range from deterministic to probabilistic approaches. Currently, the Ball-and-Stick model serves as a widely implemented probabilistic approach in the tractography toolbox of the popular FSL software package and FreeSurfer/TRACULA software package. However, estimation of the features of neural fibers is complex under the scenario of two crossing neural fibers, which occurs in a sizeable proportion of voxels within the brain. A Bayesian non-linear regression is adopted, comprised of a mixture of multiple non-linear components. Such models can pose a difficult statistical estimation problem computationally. To make the approach of Ball-and-Stick model more feasible and accurate, we propose a simplified version of Ball-and-Stick model that reduces parameter space dimensionality. This simplified model is vastly more efficient in the terms of computation time required in estimating parameters pertaining to two crossing neural fibers through Bayesian simulation approaches. Moreover, the performance of this new model is comparable or better in terms of bias and estimation variance as compared to existing models. |
format | Online Article Text |
id | pubmed-6541109 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65411092019-06-12 A Simplified Crossing Fiber Model in Diffusion Weighted Imaging Yang, Sheng Ghosh, Kaushik Sakaie, Ken Sahoo, Satya S. Carr, Sarah J. Ann Tatsuoka, Curtis Front Neurosci Neuroscience Diffusion MRI (dMRI) is a vital source of imaging data for identifying anatomical connections in the living human brain that form the substrate for information transfer between brain regions. dMRI can thus play a central role toward our understanding of brain function. The quantitative modeling and analysis of dMRI data deduces the features of neural fibers at the voxel level, such as direction and density. The modeling methods that have been developed range from deterministic to probabilistic approaches. Currently, the Ball-and-Stick model serves as a widely implemented probabilistic approach in the tractography toolbox of the popular FSL software package and FreeSurfer/TRACULA software package. However, estimation of the features of neural fibers is complex under the scenario of two crossing neural fibers, which occurs in a sizeable proportion of voxels within the brain. A Bayesian non-linear regression is adopted, comprised of a mixture of multiple non-linear components. Such models can pose a difficult statistical estimation problem computationally. To make the approach of Ball-and-Stick model more feasible and accurate, we propose a simplified version of Ball-and-Stick model that reduces parameter space dimensionality. This simplified model is vastly more efficient in the terms of computation time required in estimating parameters pertaining to two crossing neural fibers through Bayesian simulation approaches. Moreover, the performance of this new model is comparable or better in terms of bias and estimation variance as compared to existing models. Frontiers Media S.A. 2019-05-22 /pmc/articles/PMC6541109/ /pubmed/31191215 http://dx.doi.org/10.3389/fnins.2019.00492 Text en Copyright © 2019 Yang, Ghosh, Sakaie, Sahoo, Carr and Tatsuoka. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Yang, Sheng Ghosh, Kaushik Sakaie, Ken Sahoo, Satya S. Carr, Sarah J. Ann Tatsuoka, Curtis A Simplified Crossing Fiber Model in Diffusion Weighted Imaging |
title | A Simplified Crossing Fiber Model in Diffusion Weighted Imaging |
title_full | A Simplified Crossing Fiber Model in Diffusion Weighted Imaging |
title_fullStr | A Simplified Crossing Fiber Model in Diffusion Weighted Imaging |
title_full_unstemmed | A Simplified Crossing Fiber Model in Diffusion Weighted Imaging |
title_short | A Simplified Crossing Fiber Model in Diffusion Weighted Imaging |
title_sort | simplified crossing fiber model in diffusion weighted imaging |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541109/ https://www.ncbi.nlm.nih.gov/pubmed/31191215 http://dx.doi.org/10.3389/fnins.2019.00492 |
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