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Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons

Somatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is...

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Autores principales: Iavarone, Elisabetta, Yi, Jane, Shi, Ying, Zandt, Bas-Jan, O’Reilly, Christian, Van Geit, Werner, Rössert, Christian, Markram, Henry, Hill, Sean L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541309/
https://www.ncbi.nlm.nih.gov/pubmed/31095552
http://dx.doi.org/10.1371/journal.pcbi.1006753
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author Iavarone, Elisabetta
Yi, Jane
Shi, Ying
Zandt, Bas-Jan
O’Reilly, Christian
Van Geit, Werner
Rössert, Christian
Markram, Henry
Hill, Sean L.
author_facet Iavarone, Elisabetta
Yi, Jane
Shi, Ying
Zandt, Bas-Jan
O’Reilly, Christian
Van Geit, Werner
Rössert, Christian
Markram, Henry
Hill, Sean L.
author_sort Iavarone, Elisabetta
collection PubMed
description Somatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is reflected at the cellular level by the ability to generate action potentials in two distinct firing modes, called tonic firing and low-threshold bursting. Although the general properties of TC neurons are known, we still lack a detailed characterization of their morphological and electrical properties in the VB thalamus. The aim of this study was to build biophysically-detailed models of VB TC neurons explicitly constrained with experimental data from rats. We recorded the electrical activity of VB neurons (N = 49) and reconstructed morphologies in 3D (N = 50) by applying standardized protocols. After identifying distinct electrical types, we used a multi-objective optimization to fit single neuron electrical models (e-models), which yielded multiple solutions consistent with the experimental data. The models were tested for generalization using electrical stimuli and neuron morphologies not used during fitting. A local sensitivity analysis revealed that the e-models are robust to small parameter changes and that all the parameters were constrained by one or more features. The e-models, when tested in combination with different morphologies, showed that the electrical behavior is substantially preserved when changing dendritic structure and that the e-models were not overfit to a specific morphology. The models and their analysis show that automatic parameter search can be applied to capture complex firing behavior, such as co-existence of tonic firing and low-threshold bursting over a wide range of parameter sets and in combination with different neuron morphologies.
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spelling pubmed-65413092019-06-05 Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons Iavarone, Elisabetta Yi, Jane Shi, Ying Zandt, Bas-Jan O’Reilly, Christian Van Geit, Werner Rössert, Christian Markram, Henry Hill, Sean L. PLoS Comput Biol Research Article Somatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is reflected at the cellular level by the ability to generate action potentials in two distinct firing modes, called tonic firing and low-threshold bursting. Although the general properties of TC neurons are known, we still lack a detailed characterization of their morphological and electrical properties in the VB thalamus. The aim of this study was to build biophysically-detailed models of VB TC neurons explicitly constrained with experimental data from rats. We recorded the electrical activity of VB neurons (N = 49) and reconstructed morphologies in 3D (N = 50) by applying standardized protocols. After identifying distinct electrical types, we used a multi-objective optimization to fit single neuron electrical models (e-models), which yielded multiple solutions consistent with the experimental data. The models were tested for generalization using electrical stimuli and neuron morphologies not used during fitting. A local sensitivity analysis revealed that the e-models are robust to small parameter changes and that all the parameters were constrained by one or more features. The e-models, when tested in combination with different morphologies, showed that the electrical behavior is substantially preserved when changing dendritic structure and that the e-models were not overfit to a specific morphology. The models and their analysis show that automatic parameter search can be applied to capture complex firing behavior, such as co-existence of tonic firing and low-threshold bursting over a wide range of parameter sets and in combination with different neuron morphologies. Public Library of Science 2019-05-16 /pmc/articles/PMC6541309/ /pubmed/31095552 http://dx.doi.org/10.1371/journal.pcbi.1006753 Text en © 2019 Iavarone et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Iavarone, Elisabetta
Yi, Jane
Shi, Ying
Zandt, Bas-Jan
O’Reilly, Christian
Van Geit, Werner
Rössert, Christian
Markram, Henry
Hill, Sean L.
Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
title Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
title_full Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
title_fullStr Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
title_full_unstemmed Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
title_short Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
title_sort experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541309/
https://www.ncbi.nlm.nih.gov/pubmed/31095552
http://dx.doi.org/10.1371/journal.pcbi.1006753
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