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Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network

PURPOSE: Intra-operative measurement of tissue oxygen saturation ([Formula: see text] ) is important in detection of ischaemia, monitoring perfusion and identifying disease. Hyperspectral imaging (HSI) measures the optical reflectance spectrum of the tissue and uses this information to quantify its...

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Autores principales: Li, Qingbiao, Lin, Jianyu, Clancy, Neil T., Elson, Daniel S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6544606/
https://www.ncbi.nlm.nih.gov/pubmed/30900114
http://dx.doi.org/10.1007/s11548-019-01940-2
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author Li, Qingbiao
Lin, Jianyu
Clancy, Neil T.
Elson, Daniel S.
author_facet Li, Qingbiao
Lin, Jianyu
Clancy, Neil T.
Elson, Daniel S.
author_sort Li, Qingbiao
collection PubMed
description PURPOSE: Intra-operative measurement of tissue oxygen saturation ([Formula: see text] ) is important in detection of ischaemia, monitoring perfusion and identifying disease. Hyperspectral imaging (HSI) measures the optical reflectance spectrum of the tissue and uses this information to quantify its composition, including [Formula: see text] . However, real-time monitoring is difficult due to capture rate and data processing time. METHODS: An endoscopic system based on a multi-fibre probe was previously developed to sparsely capture HSI data (sHSI). These were combined with RGB images, via a deep neural network, to generate high-resolution hypercubes and calculate [Formula: see text] . To improve accuracy and processing speed, we propose a dual-input conditional generative adversarial network, Dual2StO2, to directly estimate [Formula: see text] by fusing features from both RGB and sHSI. RESULTS: Validation experiments were carried out on in vivo porcine bowel data, where the ground truth [Formula: see text] was generated from the HSI camera. Performance was also compared to our previous super-spectral-resolution network, SSRNet in terms of mean [Formula: see text] prediction accuracy and structural similarity metrics. Dual2StO2 was also tested using simulated probe data with varying fibre number. CONCLUSIONS: [Formula: see text] estimation by Dual2StO2 is visually closer to ground truth in general structure and achieves higher prediction accuracy and faster processing speed than SSRNet. Simulations showed that results improved when a greater number of fibres are used in the probe. Future work will include refinement of the network architecture, hardware optimization based on simulation results, and evaluation of the technique in clinical applications beyond [Formula: see text] estimation.
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spelling pubmed-65446062019-06-19 Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network Li, Qingbiao Lin, Jianyu Clancy, Neil T. Elson, Daniel S. Int J Comput Assist Radiol Surg Original Article PURPOSE: Intra-operative measurement of tissue oxygen saturation ([Formula: see text] ) is important in detection of ischaemia, monitoring perfusion and identifying disease. Hyperspectral imaging (HSI) measures the optical reflectance spectrum of the tissue and uses this information to quantify its composition, including [Formula: see text] . However, real-time monitoring is difficult due to capture rate and data processing time. METHODS: An endoscopic system based on a multi-fibre probe was previously developed to sparsely capture HSI data (sHSI). These were combined with RGB images, via a deep neural network, to generate high-resolution hypercubes and calculate [Formula: see text] . To improve accuracy and processing speed, we propose a dual-input conditional generative adversarial network, Dual2StO2, to directly estimate [Formula: see text] by fusing features from both RGB and sHSI. RESULTS: Validation experiments were carried out on in vivo porcine bowel data, where the ground truth [Formula: see text] was generated from the HSI camera. Performance was also compared to our previous super-spectral-resolution network, SSRNet in terms of mean [Formula: see text] prediction accuracy and structural similarity metrics. Dual2StO2 was also tested using simulated probe data with varying fibre number. CONCLUSIONS: [Formula: see text] estimation by Dual2StO2 is visually closer to ground truth in general structure and achieves higher prediction accuracy and faster processing speed than SSRNet. Simulations showed that results improved when a greater number of fibres are used in the probe. Future work will include refinement of the network architecture, hardware optimization based on simulation results, and evaluation of the technique in clinical applications beyond [Formula: see text] estimation. Springer International Publishing 2019-03-21 2019 /pmc/articles/PMC6544606/ /pubmed/30900114 http://dx.doi.org/10.1007/s11548-019-01940-2 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Article
Li, Qingbiao
Lin, Jianyu
Clancy, Neil T.
Elson, Daniel S.
Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network
title Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network
title_full Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network
title_fullStr Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network
title_full_unstemmed Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network
title_short Estimation of tissue oxygen saturation from RGB images and sparse hyperspectral signals based on conditional generative adversarial network
title_sort estimation of tissue oxygen saturation from rgb images and sparse hyperspectral signals based on conditional generative adversarial network
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6544606/
https://www.ncbi.nlm.nih.gov/pubmed/30900114
http://dx.doi.org/10.1007/s11548-019-01940-2
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AT clancyneilt estimationoftissueoxygensaturationfromrgbimagesandsparsehyperspectralsignalsbasedonconditionalgenerativeadversarialnetwork
AT elsondaniels estimationoftissueoxygensaturationfromrgbimagesandsparsehyperspectralsignalsbasedonconditionalgenerativeadversarialnetwork