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Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content
Near-infrared spectroscopy (NIRS) is a high-throughput technology with potential to infer nitrogen (N), phosphorus (P) and carbon (C) content of all vascular plants based on empirical calibrations with chemical analysis, but is currently limited to the sample populations upon which it is based. Here...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547662/ https://www.ncbi.nlm.nih.gov/pubmed/31164672 http://dx.doi.org/10.1038/s41598-019-44558-9 |
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author | Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Böhner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne |
author_facet | Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Böhner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne |
author_sort | Murguzur, Francisco Javier Ancin |
collection | PubMed |
description | Near-infrared spectroscopy (NIRS) is a high-throughput technology with potential to infer nitrogen (N), phosphorus (P) and carbon (C) content of all vascular plants based on empirical calibrations with chemical analysis, but is currently limited to the sample populations upon which it is based. Here we provide a first step towards a global arctic-alpine NIRS model of foliar N, P and C content. We found calibration models to perform well (R(2)(validation) = 0.94 and RMSEP = 0.20% for N, R(2)(validation) = 0.76 and RMSEP = 0.05% for P and R(2)(validation) = 0.82 and RMSEP = 1.16% for C), integrating 97 species, nine functional groups, three levels of phenology, a range of habitats and two biogeographic regions (the Alps and Fennoscandia). Furthermore, when applied for predicting foliar N, P and C content in samples from a new biogeographic region (Svalbard), our arctic-alpine NIRS model performed well. The precision of the resulting NIRS method meet international requirements, indicating one NIRS measurement scan of a foliar sample will predict its N, P and C content with precision according to standard method performance. The modelling scripts for the prediction of foliar N, P and C content using NIRS along with the calibration models upon which the predictions are based are provided. The modelling scripts can be applied in other labs, and can easily be expanded with data from new biogeographic regions of interest, building the global arctic-alpine model. |
format | Online Article Text |
id | pubmed-6547662 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65476622019-06-10 Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Böhner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne Sci Rep Article Near-infrared spectroscopy (NIRS) is a high-throughput technology with potential to infer nitrogen (N), phosphorus (P) and carbon (C) content of all vascular plants based on empirical calibrations with chemical analysis, but is currently limited to the sample populations upon which it is based. Here we provide a first step towards a global arctic-alpine NIRS model of foliar N, P and C content. We found calibration models to perform well (R(2)(validation) = 0.94 and RMSEP = 0.20% for N, R(2)(validation) = 0.76 and RMSEP = 0.05% for P and R(2)(validation) = 0.82 and RMSEP = 1.16% for C), integrating 97 species, nine functional groups, three levels of phenology, a range of habitats and two biogeographic regions (the Alps and Fennoscandia). Furthermore, when applied for predicting foliar N, P and C content in samples from a new biogeographic region (Svalbard), our arctic-alpine NIRS model performed well. The precision of the resulting NIRS method meet international requirements, indicating one NIRS measurement scan of a foliar sample will predict its N, P and C content with precision according to standard method performance. The modelling scripts for the prediction of foliar N, P and C content using NIRS along with the calibration models upon which the predictions are based are provided. The modelling scripts can be applied in other labs, and can easily be expanded with data from new biogeographic regions of interest, building the global arctic-alpine model. Nature Publishing Group UK 2019-06-04 /pmc/articles/PMC6547662/ /pubmed/31164672 http://dx.doi.org/10.1038/s41598-019-44558-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Murguzur, Francisco Javier Ancin Bison, Marjorie Smis, Adriaan Böhner, Hanna Struyf, Eric Meire, Patrick Bråthen, Kari Anne Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_full | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_fullStr | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_full_unstemmed | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_short | Towards a global arctic-alpine model for Near-infrared reflectance spectroscopy (NIRS) predictions of foliar nitrogen, phosphorus and carbon content |
title_sort | towards a global arctic-alpine model for near-infrared reflectance spectroscopy (nirs) predictions of foliar nitrogen, phosphorus and carbon content |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547662/ https://www.ncbi.nlm.nih.gov/pubmed/31164672 http://dx.doi.org/10.1038/s41598-019-44558-9 |
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