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Heterogenising study samples across testing time improves reproducibility of behavioural data
The ongoing debate on the reproducibility crisis in the life sciences highlights the need for a rethinking of current methodologies. Since the trend towards ever more standardised experiments is at risk of causing highly idiosyncratic results, an alternative approach has been suggested to improve th...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547843/ https://www.ncbi.nlm.nih.gov/pubmed/31160667 http://dx.doi.org/10.1038/s41598-019-44705-2 |
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author | Bodden, Carina von Kortzfleisch, Vanessa Tabea Karwinkel, Fabian Kaiser, Sylvia Sachser, Norbert Richter, S. Helene |
author_facet | Bodden, Carina von Kortzfleisch, Vanessa Tabea Karwinkel, Fabian Kaiser, Sylvia Sachser, Norbert Richter, S. Helene |
author_sort | Bodden, Carina |
collection | PubMed |
description | The ongoing debate on the reproducibility crisis in the life sciences highlights the need for a rethinking of current methodologies. Since the trend towards ever more standardised experiments is at risk of causing highly idiosyncratic results, an alternative approach has been suggested to improve the robustness of findings, particularly from animal experiments. This concept, referred to as “systematic heterogenisation”, postulates increased external validity and hence, improved reproducibility by introducing variation systematically into a single experiment. However, the implementation of this concept in practice requires the identification of suitable heterogenisation factors. Here we show that the time of day at which experiments are conducted has a significant impact on the reproducibility of behavioural differences between two mouse strains, C57BL/6J and DBA/2N. Specifically, we found remarkably varying strain effects on anxiety, exploration, and learning, depending on the testing time, i.e. morning, noon or afternoon. In a follow-up simulation approach, we demonstrate that the systematic inclusion of two different testing times significantly improved reproducibility between replicate experiments. Our results emphasise the potential of time as an effective and easy-to-handle heterogenisation factor for single-laboratory studies. Its systematic variation likely improves reproducibility of research findings and hence contributes to a fundamental issue of experimental design and conduct in laboratory animal science. |
format | Online Article Text |
id | pubmed-6547843 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65478432019-06-10 Heterogenising study samples across testing time improves reproducibility of behavioural data Bodden, Carina von Kortzfleisch, Vanessa Tabea Karwinkel, Fabian Kaiser, Sylvia Sachser, Norbert Richter, S. Helene Sci Rep Article The ongoing debate on the reproducibility crisis in the life sciences highlights the need for a rethinking of current methodologies. Since the trend towards ever more standardised experiments is at risk of causing highly idiosyncratic results, an alternative approach has been suggested to improve the robustness of findings, particularly from animal experiments. This concept, referred to as “systematic heterogenisation”, postulates increased external validity and hence, improved reproducibility by introducing variation systematically into a single experiment. However, the implementation of this concept in practice requires the identification of suitable heterogenisation factors. Here we show that the time of day at which experiments are conducted has a significant impact on the reproducibility of behavioural differences between two mouse strains, C57BL/6J and DBA/2N. Specifically, we found remarkably varying strain effects on anxiety, exploration, and learning, depending on the testing time, i.e. morning, noon or afternoon. In a follow-up simulation approach, we demonstrate that the systematic inclusion of two different testing times significantly improved reproducibility between replicate experiments. Our results emphasise the potential of time as an effective and easy-to-handle heterogenisation factor for single-laboratory studies. Its systematic variation likely improves reproducibility of research findings and hence contributes to a fundamental issue of experimental design and conduct in laboratory animal science. Nature Publishing Group UK 2019-06-03 /pmc/articles/PMC6547843/ /pubmed/31160667 http://dx.doi.org/10.1038/s41598-019-44705-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Bodden, Carina von Kortzfleisch, Vanessa Tabea Karwinkel, Fabian Kaiser, Sylvia Sachser, Norbert Richter, S. Helene Heterogenising study samples across testing time improves reproducibility of behavioural data |
title | Heterogenising study samples across testing time improves reproducibility of behavioural data |
title_full | Heterogenising study samples across testing time improves reproducibility of behavioural data |
title_fullStr | Heterogenising study samples across testing time improves reproducibility of behavioural data |
title_full_unstemmed | Heterogenising study samples across testing time improves reproducibility of behavioural data |
title_short | Heterogenising study samples across testing time improves reproducibility of behavioural data |
title_sort | heterogenising study samples across testing time improves reproducibility of behavioural data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547843/ https://www.ncbi.nlm.nih.gov/pubmed/31160667 http://dx.doi.org/10.1038/s41598-019-44705-2 |
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