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Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
Dendrobium is the largest genus of orchids most of which have excellent medicinal properties. Fresh stems of some species have been consumed in daily life by Asians for thousands of years. However, there are differences in flavour and clinical efficacy among different species. Therefore, it is neces...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549973/ https://www.ncbi.nlm.nih.gov/pubmed/31218070 http://dx.doi.org/10.1098/rsos.190399 |
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author | Wang, Ye Zuo, Zhi-Tian Huang, Heng-Yu Wang, Yuan-Zhong |
author_facet | Wang, Ye Zuo, Zhi-Tian Huang, Heng-Yu Wang, Yuan-Zhong |
author_sort | Wang, Ye |
collection | PubMed |
description | Dendrobium is the largest genus of orchids most of which have excellent medicinal properties. Fresh stems of some species have been consumed in daily life by Asians for thousands of years. However, there are differences in flavour and clinical efficacy among different species. Therefore, it is necessary for a detector to establish an effective and rapid method controlling botanical origins of these crude materials. In our study, three spectroscopies including mid-infrared (MIR) (transmission and reflection mode) and near-infrared (NIR) spectra were investigated for authentication of 12 Dendrobium species. Generally, two fusion strategies, reflection MIR and NIR spectra, were combined with three mathematical models (random forest, support vector machine with grid search (SVM-GS) and partial least-squares discrimination analysis (PLS-DA)) for discrimination analysis. In conclusion, a low-level fusion strategy comprising two spectra after pretreated by the second derivative and multiplicative scatter correction was recommended for discrimination analysis because of its excellent performance in three models. Compared with MIR spectra, NIR spectra were more responsible for the discrimination according to a bi-plot analysis of PLS-DA. Moreover, SVM-GS and PLS-DA were suitable for accurate discrimination (100% accuracy rates) of calibration and validation sets. The protocol combined with low-level fusion strategy and chemometrics provides a rapid and effective reference for control of botanical origins in crude Dendrobium materials. |
format | Online Article Text |
id | pubmed-6549973 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-65499732019-06-19 Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models Wang, Ye Zuo, Zhi-Tian Huang, Heng-Yu Wang, Yuan-Zhong R Soc Open Sci Chemistry Dendrobium is the largest genus of orchids most of which have excellent medicinal properties. Fresh stems of some species have been consumed in daily life by Asians for thousands of years. However, there are differences in flavour and clinical efficacy among different species. Therefore, it is necessary for a detector to establish an effective and rapid method controlling botanical origins of these crude materials. In our study, three spectroscopies including mid-infrared (MIR) (transmission and reflection mode) and near-infrared (NIR) spectra were investigated for authentication of 12 Dendrobium species. Generally, two fusion strategies, reflection MIR and NIR spectra, were combined with three mathematical models (random forest, support vector machine with grid search (SVM-GS) and partial least-squares discrimination analysis (PLS-DA)) for discrimination analysis. In conclusion, a low-level fusion strategy comprising two spectra after pretreated by the second derivative and multiplicative scatter correction was recommended for discrimination analysis because of its excellent performance in three models. Compared with MIR spectra, NIR spectra were more responsible for the discrimination according to a bi-plot analysis of PLS-DA. Moreover, SVM-GS and PLS-DA were suitable for accurate discrimination (100% accuracy rates) of calibration and validation sets. The protocol combined with low-level fusion strategy and chemometrics provides a rapid and effective reference for control of botanical origins in crude Dendrobium materials. The Royal Society 2019-05-22 /pmc/articles/PMC6549973/ /pubmed/31218070 http://dx.doi.org/10.1098/rsos.190399 Text en © 2019 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Chemistry Wang, Ye Zuo, Zhi-Tian Huang, Heng-Yu Wang, Yuan-Zhong Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models |
title | Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models |
title_full | Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models |
title_fullStr | Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models |
title_full_unstemmed | Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models |
title_short | Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models |
title_sort | original plant traceability of dendrobium species using multi-spectroscopy fusion and mathematical models |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549973/ https://www.ncbi.nlm.nih.gov/pubmed/31218070 http://dx.doi.org/10.1098/rsos.190399 |
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