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Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models

Dendrobium is the largest genus of orchids most of which have excellent medicinal properties. Fresh stems of some species have been consumed in daily life by Asians for thousands of years. However, there are differences in flavour and clinical efficacy among different species. Therefore, it is neces...

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Autores principales: Wang, Ye, Zuo, Zhi-Tian, Huang, Heng-Yu, Wang, Yuan-Zhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549973/
https://www.ncbi.nlm.nih.gov/pubmed/31218070
http://dx.doi.org/10.1098/rsos.190399
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author Wang, Ye
Zuo, Zhi-Tian
Huang, Heng-Yu
Wang, Yuan-Zhong
author_facet Wang, Ye
Zuo, Zhi-Tian
Huang, Heng-Yu
Wang, Yuan-Zhong
author_sort Wang, Ye
collection PubMed
description Dendrobium is the largest genus of orchids most of which have excellent medicinal properties. Fresh stems of some species have been consumed in daily life by Asians for thousands of years. However, there are differences in flavour and clinical efficacy among different species. Therefore, it is necessary for a detector to establish an effective and rapid method controlling botanical origins of these crude materials. In our study, three spectroscopies including mid-infrared (MIR) (transmission and reflection mode) and near-infrared (NIR) spectra were investigated for authentication of 12 Dendrobium species. Generally, two fusion strategies, reflection MIR and NIR spectra, were combined with three mathematical models (random forest, support vector machine with grid search (SVM-GS) and partial least-squares discrimination analysis (PLS-DA)) for discrimination analysis. In conclusion, a low-level fusion strategy comprising two spectra after pretreated by the second derivative and multiplicative scatter correction was recommended for discrimination analysis because of its excellent performance in three models. Compared with MIR spectra, NIR spectra were more responsible for the discrimination according to a bi-plot analysis of PLS-DA. Moreover, SVM-GS and PLS-DA were suitable for accurate discrimination (100% accuracy rates) of calibration and validation sets. The protocol combined with low-level fusion strategy and chemometrics provides a rapid and effective reference for control of botanical origins in crude Dendrobium materials.
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spelling pubmed-65499732019-06-19 Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models Wang, Ye Zuo, Zhi-Tian Huang, Heng-Yu Wang, Yuan-Zhong R Soc Open Sci Chemistry Dendrobium is the largest genus of orchids most of which have excellent medicinal properties. Fresh stems of some species have been consumed in daily life by Asians for thousands of years. However, there are differences in flavour and clinical efficacy among different species. Therefore, it is necessary for a detector to establish an effective and rapid method controlling botanical origins of these crude materials. In our study, three spectroscopies including mid-infrared (MIR) (transmission and reflection mode) and near-infrared (NIR) spectra were investigated for authentication of 12 Dendrobium species. Generally, two fusion strategies, reflection MIR and NIR spectra, were combined with three mathematical models (random forest, support vector machine with grid search (SVM-GS) and partial least-squares discrimination analysis (PLS-DA)) for discrimination analysis. In conclusion, a low-level fusion strategy comprising two spectra after pretreated by the second derivative and multiplicative scatter correction was recommended for discrimination analysis because of its excellent performance in three models. Compared with MIR spectra, NIR spectra were more responsible for the discrimination according to a bi-plot analysis of PLS-DA. Moreover, SVM-GS and PLS-DA were suitable for accurate discrimination (100% accuracy rates) of calibration and validation sets. The protocol combined with low-level fusion strategy and chemometrics provides a rapid and effective reference for control of botanical origins in crude Dendrobium materials. The Royal Society 2019-05-22 /pmc/articles/PMC6549973/ /pubmed/31218070 http://dx.doi.org/10.1098/rsos.190399 Text en © 2019 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Chemistry
Wang, Ye
Zuo, Zhi-Tian
Huang, Heng-Yu
Wang, Yuan-Zhong
Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
title Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
title_full Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
title_fullStr Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
title_full_unstemmed Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
title_short Original plant traceability of Dendrobium species using multi-spectroscopy fusion and mathematical models
title_sort original plant traceability of dendrobium species using multi-spectroscopy fusion and mathematical models
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549973/
https://www.ncbi.nlm.nih.gov/pubmed/31218070
http://dx.doi.org/10.1098/rsos.190399
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