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Machine-learned epidemiology: real-time detection of foodborne illness at scale

Machine learning has become an increasingly powerful tool for solving complex problems, and its application in public health has been underutilized. The objective of this study is to test the efficacy of a machine-learned model of foodborne illness detection in a real-world setting. To this end, we...

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Autores principales: Sadilek, Adam, Caty, Stephanie, DiPrete, Lauren, Mansour, Raed, Schenk, Tom, Bergtholdt, Mark, Jha, Ashish, Ramaswami, Prem, Gabrilovich, Evgeniy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550174/
https://www.ncbi.nlm.nih.gov/pubmed/31304318
http://dx.doi.org/10.1038/s41746-018-0045-1
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author Sadilek, Adam
Caty, Stephanie
DiPrete, Lauren
Mansour, Raed
Schenk, Tom
Bergtholdt, Mark
Jha, Ashish
Ramaswami, Prem
Gabrilovich, Evgeniy
author_facet Sadilek, Adam
Caty, Stephanie
DiPrete, Lauren
Mansour, Raed
Schenk, Tom
Bergtholdt, Mark
Jha, Ashish
Ramaswami, Prem
Gabrilovich, Evgeniy
author_sort Sadilek, Adam
collection PubMed
description Machine learning has become an increasingly powerful tool for solving complex problems, and its application in public health has been underutilized. The objective of this study is to test the efficacy of a machine-learned model of foodborne illness detection in a real-world setting. To this end, we built FINDER, a machine-learned model for real-time detection of foodborne illness using anonymous and aggregated web search and location data. We computed the fraction of people who visited a particular restaurant and later searched for terms indicative of food poisoning to identify potentially unsafe restaurants. We used this information to focus restaurant inspections in two cities and demonstrated that FINDER improves the accuracy of health inspections; restaurants identified by FINDER are 3.1 times as likely to be deemed unsafe during the inspection as restaurants identified by existing methods. Additionally, FINDER enables us to ascertain previously intractable epidemiological information, for example, in 38% of cases the restaurant potentially causing food poisoning was not the last one visited, which may explain the lower precision of complaint-based inspections. We found that FINDER is able to reliably identify restaurants that have an active lapse in food safety, allowing for implementation of corrective actions that would prevent the potential spread of foodborne illness.
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spelling pubmed-65501742019-07-12 Machine-learned epidemiology: real-time detection of foodborne illness at scale Sadilek, Adam Caty, Stephanie DiPrete, Lauren Mansour, Raed Schenk, Tom Bergtholdt, Mark Jha, Ashish Ramaswami, Prem Gabrilovich, Evgeniy NPJ Digit Med Article Machine learning has become an increasingly powerful tool for solving complex problems, and its application in public health has been underutilized. The objective of this study is to test the efficacy of a machine-learned model of foodborne illness detection in a real-world setting. To this end, we built FINDER, a machine-learned model for real-time detection of foodborne illness using anonymous and aggregated web search and location data. We computed the fraction of people who visited a particular restaurant and later searched for terms indicative of food poisoning to identify potentially unsafe restaurants. We used this information to focus restaurant inspections in two cities and demonstrated that FINDER improves the accuracy of health inspections; restaurants identified by FINDER are 3.1 times as likely to be deemed unsafe during the inspection as restaurants identified by existing methods. Additionally, FINDER enables us to ascertain previously intractable epidemiological information, for example, in 38% of cases the restaurant potentially causing food poisoning was not the last one visited, which may explain the lower precision of complaint-based inspections. We found that FINDER is able to reliably identify restaurants that have an active lapse in food safety, allowing for implementation of corrective actions that would prevent the potential spread of foodborne illness. Nature Publishing Group UK 2018-11-06 /pmc/articles/PMC6550174/ /pubmed/31304318 http://dx.doi.org/10.1038/s41746-018-0045-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Sadilek, Adam
Caty, Stephanie
DiPrete, Lauren
Mansour, Raed
Schenk, Tom
Bergtholdt, Mark
Jha, Ashish
Ramaswami, Prem
Gabrilovich, Evgeniy
Machine-learned epidemiology: real-time detection of foodborne illness at scale
title Machine-learned epidemiology: real-time detection of foodborne illness at scale
title_full Machine-learned epidemiology: real-time detection of foodborne illness at scale
title_fullStr Machine-learned epidemiology: real-time detection of foodborne illness at scale
title_full_unstemmed Machine-learned epidemiology: real-time detection of foodborne illness at scale
title_short Machine-learned epidemiology: real-time detection of foodborne illness at scale
title_sort machine-learned epidemiology: real-time detection of foodborne illness at scale
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550174/
https://www.ncbi.nlm.nih.gov/pubmed/31304318
http://dx.doi.org/10.1038/s41746-018-0045-1
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