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Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models

Machine learning algorithms that use data streams captured from soft wearable sensors have the potential to automatically detect PD symptoms and inform clinicians about the progression of disease. However, these algorithms must be trained with annotated data from clinical experts who can recognize s...

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Autores principales: Lonini, Luca, Dai, Andrew, Shawen, Nicholas, Simuni, Tanya, Poon, Cynthia, Shimanovich, Leo, Daeschler, Margaret, Ghaffari, Roozbeh, Rogers, John A., Jayaraman, Arun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550186/
https://www.ncbi.nlm.nih.gov/pubmed/31304341
http://dx.doi.org/10.1038/s41746-018-0071-z
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author Lonini, Luca
Dai, Andrew
Shawen, Nicholas
Simuni, Tanya
Poon, Cynthia
Shimanovich, Leo
Daeschler, Margaret
Ghaffari, Roozbeh
Rogers, John A.
Jayaraman, Arun
author_facet Lonini, Luca
Dai, Andrew
Shawen, Nicholas
Simuni, Tanya
Poon, Cynthia
Shimanovich, Leo
Daeschler, Margaret
Ghaffari, Roozbeh
Rogers, John A.
Jayaraman, Arun
author_sort Lonini, Luca
collection PubMed
description Machine learning algorithms that use data streams captured from soft wearable sensors have the potential to automatically detect PD symptoms and inform clinicians about the progression of disease. However, these algorithms must be trained with annotated data from clinical experts who can recognize symptoms, and collecting such data are costly. Understanding how many sensors and how much labeled data are required is key to successfully deploying these models outside of the clinic. Here we recorded movement data using 6 flexible wearable sensors in 20 individuals with PD over the course of multiple clinical assessments conducted on 1 day and repeated 2 weeks later. Participants performed 13 common tasks, such as walking or typing, and a clinician rated the severity of symptoms (bradykinesia and tremor). We then trained convolutional neural networks and statistical ensembles to detect whether a segment of movement showed signs of bradykinesia or tremor based on data from tasks performed by other individuals. Our results show that a single wearable sensor on the back of the hand is sufficient for detecting bradykinesia and tremor in the upper extremities, whereas using sensors on both sides does not improve performance. Increasing the amount of training data by adding other individuals can lead to improved performance, but repeating assessments with the same individuals—even at different medication states—does not substantially improve detection across days. Our results suggest that PD symptoms can be detected during a variety of activities and are best modeled by a dataset incorporating many individuals.
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spelling pubmed-65501862019-07-12 Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models Lonini, Luca Dai, Andrew Shawen, Nicholas Simuni, Tanya Poon, Cynthia Shimanovich, Leo Daeschler, Margaret Ghaffari, Roozbeh Rogers, John A. Jayaraman, Arun NPJ Digit Med Article Machine learning algorithms that use data streams captured from soft wearable sensors have the potential to automatically detect PD symptoms and inform clinicians about the progression of disease. However, these algorithms must be trained with annotated data from clinical experts who can recognize symptoms, and collecting such data are costly. Understanding how many sensors and how much labeled data are required is key to successfully deploying these models outside of the clinic. Here we recorded movement data using 6 flexible wearable sensors in 20 individuals with PD over the course of multiple clinical assessments conducted on 1 day and repeated 2 weeks later. Participants performed 13 common tasks, such as walking or typing, and a clinician rated the severity of symptoms (bradykinesia and tremor). We then trained convolutional neural networks and statistical ensembles to detect whether a segment of movement showed signs of bradykinesia or tremor based on data from tasks performed by other individuals. Our results show that a single wearable sensor on the back of the hand is sufficient for detecting bradykinesia and tremor in the upper extremities, whereas using sensors on both sides does not improve performance. Increasing the amount of training data by adding other individuals can lead to improved performance, but repeating assessments with the same individuals—even at different medication states—does not substantially improve detection across days. Our results suggest that PD symptoms can be detected during a variety of activities and are best modeled by a dataset incorporating many individuals. Nature Publishing Group UK 2018-11-23 /pmc/articles/PMC6550186/ /pubmed/31304341 http://dx.doi.org/10.1038/s41746-018-0071-z Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lonini, Luca
Dai, Andrew
Shawen, Nicholas
Simuni, Tanya
Poon, Cynthia
Shimanovich, Leo
Daeschler, Margaret
Ghaffari, Roozbeh
Rogers, John A.
Jayaraman, Arun
Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models
title Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models
title_full Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models
title_fullStr Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models
title_full_unstemmed Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models
title_short Wearable sensors for Parkinson’s disease: which data are worth collecting for training symptom detection models
title_sort wearable sensors for parkinson’s disease: which data are worth collecting for training symptom detection models
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550186/
https://www.ncbi.nlm.nih.gov/pubmed/31304341
http://dx.doi.org/10.1038/s41746-018-0071-z
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