Cargando…

FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration

The construction of high capacity data sharing networks to support increasing government and commercial data exchange has highlighted a key roadblock: the content of existing Internet-connected information remains siloed due to a multiplicity of local languages and data dictionaries. This lack of a...

Descripción completa

Detalles Bibliográficos
Autores principales: Dooley, Damion M., Griffiths, Emma J., Gosal, Gurinder S., Buttigieg, Pier L., Hoehndorf, Robert, Lange, Matthew C., Schriml, Lynn M., Brinkman, Fiona S. L., Hsiao, William W. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550238/
https://www.ncbi.nlm.nih.gov/pubmed/31304272
http://dx.doi.org/10.1038/s41538-018-0032-6
_version_ 1783424157870981120
author Dooley, Damion M.
Griffiths, Emma J.
Gosal, Gurinder S.
Buttigieg, Pier L.
Hoehndorf, Robert
Lange, Matthew C.
Schriml, Lynn M.
Brinkman, Fiona S. L.
Hsiao, William W. L.
author_facet Dooley, Damion M.
Griffiths, Emma J.
Gosal, Gurinder S.
Buttigieg, Pier L.
Hoehndorf, Robert
Lange, Matthew C.
Schriml, Lynn M.
Brinkman, Fiona S. L.
Hsiao, William W. L.
author_sort Dooley, Damion M.
collection PubMed
description The construction of high capacity data sharing networks to support increasing government and commercial data exchange has highlighted a key roadblock: the content of existing Internet-connected information remains siloed due to a multiplicity of local languages and data dictionaries. This lack of a digital lingua franca is obvious in the domain of human food as materials travel from their wild or farm origin, through processing and distribution chains, to consumers. Well defined, hierarchical vocabulary, connected with logical relationships—in other words, an ontology—is urgently needed to help tackle data harmonization problems that span the domains of food security, safety, quality, production, distribution, and consumer health and convenience. FoodOn (http://foodon.org) is a consortium-driven project to build a comprehensive and easily accessible global farm-to-fork ontology about food, that accurately and consistently describes foods commonly known in cultures from around the world. FoodOn addresses food product terminology gaps and supports food traceability. Focusing on human and domesticated animal food description, FoodOn contains animal and plant food sources, food categories and products, and other facets like preservation processes, contact surfaces, and packaging. Much of FoodOn’s vocabulary comes from transforming LanguaL, a mature and popular food indexing thesaurus, into a World Wide Web Consortium (W3C) OWL Web Ontology Language-formatted vocabulary that provides system interoperability, quality control, and software-driven intelligence. FoodOn compliments other technologies facilitating food traceability, which is becoming critical in this age of increasing globalization of food networks.
format Online
Article
Text
id pubmed-6550238
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-65502382019-07-12 FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration Dooley, Damion M. Griffiths, Emma J. Gosal, Gurinder S. Buttigieg, Pier L. Hoehndorf, Robert Lange, Matthew C. Schriml, Lynn M. Brinkman, Fiona S. L. Hsiao, William W. L. NPJ Sci Food Article The construction of high capacity data sharing networks to support increasing government and commercial data exchange has highlighted a key roadblock: the content of existing Internet-connected information remains siloed due to a multiplicity of local languages and data dictionaries. This lack of a digital lingua franca is obvious in the domain of human food as materials travel from their wild or farm origin, through processing and distribution chains, to consumers. Well defined, hierarchical vocabulary, connected with logical relationships—in other words, an ontology—is urgently needed to help tackle data harmonization problems that span the domains of food security, safety, quality, production, distribution, and consumer health and convenience. FoodOn (http://foodon.org) is a consortium-driven project to build a comprehensive and easily accessible global farm-to-fork ontology about food, that accurately and consistently describes foods commonly known in cultures from around the world. FoodOn addresses food product terminology gaps and supports food traceability. Focusing on human and domesticated animal food description, FoodOn contains animal and plant food sources, food categories and products, and other facets like preservation processes, contact surfaces, and packaging. Much of FoodOn’s vocabulary comes from transforming LanguaL, a mature and popular food indexing thesaurus, into a World Wide Web Consortium (W3C) OWL Web Ontology Language-formatted vocabulary that provides system interoperability, quality control, and software-driven intelligence. FoodOn compliments other technologies facilitating food traceability, which is becoming critical in this age of increasing globalization of food networks. Nature Publishing Group UK 2018-12-18 /pmc/articles/PMC6550238/ /pubmed/31304272 http://dx.doi.org/10.1038/s41538-018-0032-6 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Dooley, Damion M.
Griffiths, Emma J.
Gosal, Gurinder S.
Buttigieg, Pier L.
Hoehndorf, Robert
Lange, Matthew C.
Schriml, Lynn M.
Brinkman, Fiona S. L.
Hsiao, William W. L.
FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
title FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
title_full FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
title_fullStr FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
title_full_unstemmed FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
title_short FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration
title_sort foodon: a harmonized food ontology to increase global food traceability, quality control and data integration
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550238/
https://www.ncbi.nlm.nih.gov/pubmed/31304272
http://dx.doi.org/10.1038/s41538-018-0032-6
work_keys_str_mv AT dooleydamionm foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT griffithsemmaj foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT gosalgurinders foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT buttigiegpierl foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT hoehndorfrobert foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT langematthewc foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT schrimllynnm foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT brinkmanfionasl foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration
AT hsiaowilliamwl foodonaharmonizedfoodontologytoincreaseglobalfoodtraceabilityqualitycontrolanddataintegration