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Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease

Deep learning and computer vision algorithms can deliver highly accurate and automated interpretation of medical imaging to augment and assist clinicians. However, medical imaging presents uniquely pertinent obstacles such as a lack of accessible data or a high-cost of annotation. To address this, w...

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Autores principales: Madani, Ali, Ong, Jia Rui, Tibrewal, Anshul, Mofrad, Mohammad R. K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550282/
https://www.ncbi.nlm.nih.gov/pubmed/31304338
http://dx.doi.org/10.1038/s41746-018-0065-x
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author Madani, Ali
Ong, Jia Rui
Tibrewal, Anshul
Mofrad, Mohammad R. K.
author_facet Madani, Ali
Ong, Jia Rui
Tibrewal, Anshul
Mofrad, Mohammad R. K.
author_sort Madani, Ali
collection PubMed
description Deep learning and computer vision algorithms can deliver highly accurate and automated interpretation of medical imaging to augment and assist clinicians. However, medical imaging presents uniquely pertinent obstacles such as a lack of accessible data or a high-cost of annotation. To address this, we developed data-efficient deep learning classifiers for prediction tasks in cardiology. Using pipeline supervised models to focus relevant structures, we achieve an accuracy of 94.4% for 15-view still-image echocardiographic view classification and 91.2% accuracy for binary left ventricular hypertrophy classification. We then develop semi-supervised generative adversarial network models that can learn from both labeled and unlabeled data in a generalizable fashion. We achieve greater than 80% accuracy in view classification with only 4% of labeled data used in solely supervised techniques and achieve 92.3% accuracy for left ventricular hypertrophy classification. In exploring trade-offs between model type, resolution, data resources, and performance, we present a comprehensive analysis and improvements of efficient deep learning solutions for medical imaging assessment especially in cardiology.
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spelling pubmed-65502822019-07-12 Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease Madani, Ali Ong, Jia Rui Tibrewal, Anshul Mofrad, Mohammad R. K. NPJ Digit Med Article Deep learning and computer vision algorithms can deliver highly accurate and automated interpretation of medical imaging to augment and assist clinicians. However, medical imaging presents uniquely pertinent obstacles such as a lack of accessible data or a high-cost of annotation. To address this, we developed data-efficient deep learning classifiers for prediction tasks in cardiology. Using pipeline supervised models to focus relevant structures, we achieve an accuracy of 94.4% for 15-view still-image echocardiographic view classification and 91.2% accuracy for binary left ventricular hypertrophy classification. We then develop semi-supervised generative adversarial network models that can learn from both labeled and unlabeled data in a generalizable fashion. We achieve greater than 80% accuracy in view classification with only 4% of labeled data used in solely supervised techniques and achieve 92.3% accuracy for left ventricular hypertrophy classification. In exploring trade-offs between model type, resolution, data resources, and performance, we present a comprehensive analysis and improvements of efficient deep learning solutions for medical imaging assessment especially in cardiology. Nature Publishing Group UK 2018-10-18 /pmc/articles/PMC6550282/ /pubmed/31304338 http://dx.doi.org/10.1038/s41746-018-0065-x Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Madani, Ali
Ong, Jia Rui
Tibrewal, Anshul
Mofrad, Mohammad R. K.
Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
title Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
title_full Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
title_fullStr Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
title_full_unstemmed Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
title_short Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
title_sort deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550282/
https://www.ncbi.nlm.nih.gov/pubmed/31304338
http://dx.doi.org/10.1038/s41746-018-0065-x
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