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The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size
BACKGROUND: Discriminative ability is an important aspect of prediction model performance, but challenging to assess in clustered (e.g., multicenter) data. Concordance (c)-indexes may be too extreme within small clusters. We aimed to define a new approach for the assessment of discriminative ability...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6551913/ https://www.ncbi.nlm.nih.gov/pubmed/31183411 http://dx.doi.org/10.1186/s41512-019-0055-8 |
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author | van Klaveren, David Steyerberg, Ewout W. Gönen, Mithat Vergouwe, Yvonne |
author_facet | van Klaveren, David Steyerberg, Ewout W. Gönen, Mithat Vergouwe, Yvonne |
author_sort | van Klaveren, David |
collection | PubMed |
description | BACKGROUND: Discriminative ability is an important aspect of prediction model performance, but challenging to assess in clustered (e.g., multicenter) data. Concordance (c)-indexes may be too extreme within small clusters. We aimed to define a new approach for the assessment of discriminative ability in clustered data. METHODS: We assessed discriminative ability of a prediction model for the binary outcome mortality after traumatic brain injury within centers of the CRASH trial. With multilevel logistic regression analysis, we estimated cluster-specific calibration slopes which we used to obtain the recently proposed calibrated model-based concordance (c-mbc) within each cluster. We compared the c-mbc with the naïve c-index in centers of the CRASH trial and in simulations of clusters with varying calibration slopes. RESULTS: The c-mbc was less extreme in distribution than the c-index in 19 European centers (internal validation; n = 1716) and 36 non-European centers (external validation; n = 3135) of the CRASH trial. In simulations, the c-mbc was biased but less variable than the naïve c-index, resulting in lower root mean squared errors. CONCLUSIONS: The c-mbc, based on multilevel regression analysis of the calibration slope, is an attractive alternative to the c-index as a measure of discriminative ability in multicenter studies with patient clusters of limited sample size. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s41512-019-0055-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6551913 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-65519132019-06-10 The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size van Klaveren, David Steyerberg, Ewout W. Gönen, Mithat Vergouwe, Yvonne Diagn Progn Res Methodology BACKGROUND: Discriminative ability is an important aspect of prediction model performance, but challenging to assess in clustered (e.g., multicenter) data. Concordance (c)-indexes may be too extreme within small clusters. We aimed to define a new approach for the assessment of discriminative ability in clustered data. METHODS: We assessed discriminative ability of a prediction model for the binary outcome mortality after traumatic brain injury within centers of the CRASH trial. With multilevel logistic regression analysis, we estimated cluster-specific calibration slopes which we used to obtain the recently proposed calibrated model-based concordance (c-mbc) within each cluster. We compared the c-mbc with the naïve c-index in centers of the CRASH trial and in simulations of clusters with varying calibration slopes. RESULTS: The c-mbc was less extreme in distribution than the c-index in 19 European centers (internal validation; n = 1716) and 36 non-European centers (external validation; n = 3135) of the CRASH trial. In simulations, the c-mbc was biased but less variable than the naïve c-index, resulting in lower root mean squared errors. CONCLUSIONS: The c-mbc, based on multilevel regression analysis of the calibration slope, is an attractive alternative to the c-index as a measure of discriminative ability in multicenter studies with patient clusters of limited sample size. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s41512-019-0055-8) contains supplementary material, which is available to authorized users. BioMed Central 2019-06-06 /pmc/articles/PMC6551913/ /pubmed/31183411 http://dx.doi.org/10.1186/s41512-019-0055-8 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Methodology van Klaveren, David Steyerberg, Ewout W. Gönen, Mithat Vergouwe, Yvonne The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
title | The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
title_full | The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
title_fullStr | The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
title_full_unstemmed | The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
title_short | The calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
title_sort | calibrated model-based concordance improved assessment of discriminative ability in patient clusters of limited sample size |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6551913/ https://www.ncbi.nlm.nih.gov/pubmed/31183411 http://dx.doi.org/10.1186/s41512-019-0055-8 |
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