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The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research
Background: Biobanks play a critical role in cancer research by providing high quality biological samples for research. However, the availability of tumor samples in single research institutions is often limited, especially for rare cancers. In order to facilitate the search for samples scattered am...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6554332/ https://www.ncbi.nlm.nih.gov/pubmed/31214591 http://dx.doi.org/10.3389/fmed.2019.00120 |
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author | Vande Loock, Kim Van der Stock, Eva Debucquoy, Annelies Emmerechts, Katia Van Damme, Nancy Marbaix, Etienne |
author_facet | Vande Loock, Kim Van der Stock, Eva Debucquoy, Annelies Emmerechts, Katia Van Damme, Nancy Marbaix, Etienne |
author_sort | Vande Loock, Kim |
collection | PubMed |
description | Background: Biobanks play a critical role in cancer research by providing high quality biological samples for research. However, the availability of tumor samples in single research institutions is often limited, especially for rare cancers. In order to facilitate the search for samples scattered among different Belgian institutions, a nationwide virtual tumorbank project was launched and is operational since February 2012. The Belgian Virtual Tumorbank (BVT) network encompasses the tumor biobanks from eleven Belgian university hospitals that collect and store residual human tumor samples locally and is coordinated by the Belgian Cancer Registry. Materials and Methods: A web application was developed and consists of two modules. The registration module (BVTr) centralizes the tumor sample data from the local partner biobanks. The catalog module (BVTc) allows researchers to trace the tumor samples in the 11 tumor biobanks. The BVTc contains patient, medical and technical data, but excludes identifying information to ensure privacy of individuals. Automatic and manual controls guarantee high quality data on the samples requested by scientists for research purposes in oncology. A major advantage of the BVT network is that the available data can be linked to the data of the Belgian Cancer Registry for quality control purposes. Results: Currently, more than 92,000 registrations are available in the catalog. Twenty-seven percent of the residual primary tumor samples originate from breast tissue, but also less frequent localisations such as head and neck (4%), male genital organs (1.7%), and urinary tract (1%) are available. In addition to the residual tumor tissue samples, also other available material can be stored and registered by the local biobanks. The most common type is corresponding normal tissue (19%).Other frequently available materials are plasma, blood, serum, DNA, and buffy coat. Even PBMCs, RNA, cytology, and urine are available in some cases. Discussion and Conclusion: The BVT catalog is a valuable source of information for oncology research and the ultimate goal is to promote multidisciplinary cancer research (i.e., pathogenesis, disease prediction, prevention, diagnosis, treatment, and prognosis) for the benefit of all cancer patients. |
format | Online Article Text |
id | pubmed-6554332 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65543322019-06-18 The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research Vande Loock, Kim Van der Stock, Eva Debucquoy, Annelies Emmerechts, Katia Van Damme, Nancy Marbaix, Etienne Front Med (Lausanne) Medicine Background: Biobanks play a critical role in cancer research by providing high quality biological samples for research. However, the availability of tumor samples in single research institutions is often limited, especially for rare cancers. In order to facilitate the search for samples scattered among different Belgian institutions, a nationwide virtual tumorbank project was launched and is operational since February 2012. The Belgian Virtual Tumorbank (BVT) network encompasses the tumor biobanks from eleven Belgian university hospitals that collect and store residual human tumor samples locally and is coordinated by the Belgian Cancer Registry. Materials and Methods: A web application was developed and consists of two modules. The registration module (BVTr) centralizes the tumor sample data from the local partner biobanks. The catalog module (BVTc) allows researchers to trace the tumor samples in the 11 tumor biobanks. The BVTc contains patient, medical and technical data, but excludes identifying information to ensure privacy of individuals. Automatic and manual controls guarantee high quality data on the samples requested by scientists for research purposes in oncology. A major advantage of the BVT network is that the available data can be linked to the data of the Belgian Cancer Registry for quality control purposes. Results: Currently, more than 92,000 registrations are available in the catalog. Twenty-seven percent of the residual primary tumor samples originate from breast tissue, but also less frequent localisations such as head and neck (4%), male genital organs (1.7%), and urinary tract (1%) are available. In addition to the residual tumor tissue samples, also other available material can be stored and registered by the local biobanks. The most common type is corresponding normal tissue (19%).Other frequently available materials are plasma, blood, serum, DNA, and buffy coat. Even PBMCs, RNA, cytology, and urine are available in some cases. Discussion and Conclusion: The BVT catalog is a valuable source of information for oncology research and the ultimate goal is to promote multidisciplinary cancer research (i.e., pathogenesis, disease prediction, prevention, diagnosis, treatment, and prognosis) for the benefit of all cancer patients. Frontiers Media S.A. 2019-05-31 /pmc/articles/PMC6554332/ /pubmed/31214591 http://dx.doi.org/10.3389/fmed.2019.00120 Text en Copyright © 2019 Vande Loock, Van der Stock, Debucquoy, Emmerechts, Van Damme and Marbaix. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Vande Loock, Kim Van der Stock, Eva Debucquoy, Annelies Emmerechts, Katia Van Damme, Nancy Marbaix, Etienne The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research |
title | The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research |
title_full | The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research |
title_fullStr | The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research |
title_full_unstemmed | The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research |
title_short | The Belgian Virtual Tumorbank: A Tool for Translational Cancer Research |
title_sort | belgian virtual tumorbank: a tool for translational cancer research |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6554332/ https://www.ncbi.nlm.nih.gov/pubmed/31214591 http://dx.doi.org/10.3389/fmed.2019.00120 |
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