Cargando…

Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy

OBJECTIVE(S): Charcot-Marie Tooth disease (CMT) is one of the main inherited causes of motor and sensory neuropathies with variable expressivity and age-of onset. Although more than 70 genes have been identified for CMT, more studies are needed to discover other genes involved in CMT. Introduction o...

Descripción completa

Detalles Bibliográficos
Autores principales: Tahmasebi-Birgani, Maryam, Hajjari, Mohammadreza, Golchin, Neda, Shalbafan, Bita, Mohammadi-Asl, Javad, Sadeghian, Forouzan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mashhad University of Medical Sciences 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6556509/
https://www.ncbi.nlm.nih.gov/pubmed/31217940
http://dx.doi.org/10.22038/ijbms.2019.30754.7414
_version_ 1783425340244230144
author Tahmasebi-Birgani, Maryam
Hajjari, Mohammadreza
Golchin, Neda
Shalbafan, Bita
Mohammadi-Asl, Javad
Sadeghian, Forouzan
author_facet Tahmasebi-Birgani, Maryam
Hajjari, Mohammadreza
Golchin, Neda
Shalbafan, Bita
Mohammadi-Asl, Javad
Sadeghian, Forouzan
author_sort Tahmasebi-Birgani, Maryam
collection PubMed
description OBJECTIVE(S): Charcot-Marie Tooth disease (CMT) is one of the main inherited causes of motor and sensory neuropathies with variable expressivity and age-of onset. Although more than 70 genes have been identified for CMT, more studies are needed to discover other genes involved in CMT. Introduction of whole exome sequencing (WES) to capture all the exons may help to find these genes. MATERIALS AND METHODS: Here, we tried to find the genetic cause of the neuropathy in two Iranian brothers using WES. Blood sample was collected from probands and their family members to extract the genomic DNA. The extracted DNA from one of the affected case was subjected for WES. The variant calls were filtered to reveal the pathogenic variant. Presence of the candidate mutation was confirmed using Sanger sequencing. The pathogenic potential of the variant was examined using in silico software. Using ClustalW multiple alignment, the presence of variant in conserved domain of protein was investigated. The parent and another affected boy were also checked for presence of the variant using PCR-sequencing. RESULTS: The obtained data presented a novel TTC del mutation in CDS 738 of dystrophin related protein 2 (DRP2) gene, which was validated by sequencing. The variant was located in a conserved domain of DRP2 protein and predicted as pathogenic. Two affected boys were hemizygous for the mutation and received the mutation from mother. CONCLUSION: Here, we provided the evidence for the contribution of DRP2 in CMT. Also, the symptoms shed light on molecular aspect of this genetically heterogeneous disease.
format Online
Article
Text
id pubmed-6556509
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Mashhad University of Medical Sciences
record_format MEDLINE/PubMed
spelling pubmed-65565092019-06-19 Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy Tahmasebi-Birgani, Maryam Hajjari, Mohammadreza Golchin, Neda Shalbafan, Bita Mohammadi-Asl, Javad Sadeghian, Forouzan Iran J Basic Med Sci Short Communication OBJECTIVE(S): Charcot-Marie Tooth disease (CMT) is one of the main inherited causes of motor and sensory neuropathies with variable expressivity and age-of onset. Although more than 70 genes have been identified for CMT, more studies are needed to discover other genes involved in CMT. Introduction of whole exome sequencing (WES) to capture all the exons may help to find these genes. MATERIALS AND METHODS: Here, we tried to find the genetic cause of the neuropathy in two Iranian brothers using WES. Blood sample was collected from probands and their family members to extract the genomic DNA. The extracted DNA from one of the affected case was subjected for WES. The variant calls were filtered to reveal the pathogenic variant. Presence of the candidate mutation was confirmed using Sanger sequencing. The pathogenic potential of the variant was examined using in silico software. Using ClustalW multiple alignment, the presence of variant in conserved domain of protein was investigated. The parent and another affected boy were also checked for presence of the variant using PCR-sequencing. RESULTS: The obtained data presented a novel TTC del mutation in CDS 738 of dystrophin related protein 2 (DRP2) gene, which was validated by sequencing. The variant was located in a conserved domain of DRP2 protein and predicted as pathogenic. Two affected boys were hemizygous for the mutation and received the mutation from mother. CONCLUSION: Here, we provided the evidence for the contribution of DRP2 in CMT. Also, the symptoms shed light on molecular aspect of this genetically heterogeneous disease. Mashhad University of Medical Sciences 2019-05 /pmc/articles/PMC6556509/ /pubmed/31217940 http://dx.doi.org/10.22038/ijbms.2019.30754.7414 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Communication
Tahmasebi-Birgani, Maryam
Hajjari, Mohammadreza
Golchin, Neda
Shalbafan, Bita
Mohammadi-Asl, Javad
Sadeghian, Forouzan
Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy
title Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy
title_full Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy
title_fullStr Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy
title_full_unstemmed Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy
title_short Whole exome sequencing revealed a novel dystrophin-related protein-2 (DRP2) deletion in an Iranian family with symptoms of polyneuropathy
title_sort whole exome sequencing revealed a novel dystrophin-related protein-2 (drp2) deletion in an iranian family with symptoms of polyneuropathy
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6556509/
https://www.ncbi.nlm.nih.gov/pubmed/31217940
http://dx.doi.org/10.22038/ijbms.2019.30754.7414
work_keys_str_mv AT tahmasebibirganimaryam wholeexomesequencingrevealedanoveldystrophinrelatedprotein2drp2deletioninaniranianfamilywithsymptomsofpolyneuropathy
AT hajjarimohammadreza wholeexomesequencingrevealedanoveldystrophinrelatedprotein2drp2deletioninaniranianfamilywithsymptomsofpolyneuropathy
AT golchinneda wholeexomesequencingrevealedanoveldystrophinrelatedprotein2drp2deletioninaniranianfamilywithsymptomsofpolyneuropathy
AT shalbafanbita wholeexomesequencingrevealedanoveldystrophinrelatedprotein2drp2deletioninaniranianfamilywithsymptomsofpolyneuropathy
AT mohammadiasljavad wholeexomesequencingrevealedanoveldystrophinrelatedprotein2drp2deletioninaniranianfamilywithsymptomsofpolyneuropathy
AT sadeghianforouzan wholeexomesequencingrevealedanoveldystrophinrelatedprotein2drp2deletioninaniranianfamilywithsymptomsofpolyneuropathy