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Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy
Fuchs endothelial corneal dystrophy (FECD) is a bilateral inherited eye disease with advanced forms only treatable by corneal transplantation. The pathogenesis of FECD has not been worked out yet, however, trinucleotide repeat polymorphism CTG18.1 in the TCF4 gene has recently been associated with l...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6558234/ https://www.ncbi.nlm.nih.gov/pubmed/31205988 http://dx.doi.org/10.1016/j.dib.2019.104047 |
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author | Nikitina, Anastasia S. Belodedova, Alexandra V. Malyugin, Boris E. Sharova, Elena I. Kostryukova, Elena S. Larin, Andrey K. Veselovsky, Vladimir A. Antonova, Olga P. Skorodumova, Liubov O. |
author_facet | Nikitina, Anastasia S. Belodedova, Alexandra V. Malyugin, Boris E. Sharova, Elena I. Kostryukova, Elena S. Larin, Andrey K. Veselovsky, Vladimir A. Antonova, Olga P. Skorodumova, Liubov O. |
author_sort | Nikitina, Anastasia S. |
collection | PubMed |
description | Fuchs endothelial corneal dystrophy (FECD) is a bilateral inherited eye disease with advanced forms only treatable by corneal transplantation. The pathogenesis of FECD has not been worked out yet, however, trinucleotide repeat polymorphism CTG18.1 in the TCF4 gene has recently been associated with late-onset FECD. Gene expression profiling of corneal endothelium with and without this expansion can help elucidate molecular mechanisms of the disease development. Current data article represents whole transcriptome profiles of corneal endothelium obtained from 12 patients with FECD and 6 control tissues from eye bank donors. RNA sequencing data is available at NCBI Sequence Read Archive under Accession No. PRJNA524323. In addition, each patient and donor were genotyped for CTG18.1 expansion and the corresponding numbers of CTG repeats in the TCF4 gene are provided within this article. The dataset includes samples from FECD patients both with and without CTG18.1 expansion. |
format | Online Article Text |
id | pubmed-6558234 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-65582342019-06-14 Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy Nikitina, Anastasia S. Belodedova, Alexandra V. Malyugin, Boris E. Sharova, Elena I. Kostryukova, Elena S. Larin, Andrey K. Veselovsky, Vladimir A. Antonova, Olga P. Skorodumova, Liubov O. Data Brief Biochemistry, Genetics and Molecular Biology Fuchs endothelial corneal dystrophy (FECD) is a bilateral inherited eye disease with advanced forms only treatable by corneal transplantation. The pathogenesis of FECD has not been worked out yet, however, trinucleotide repeat polymorphism CTG18.1 in the TCF4 gene has recently been associated with late-onset FECD. Gene expression profiling of corneal endothelium with and without this expansion can help elucidate molecular mechanisms of the disease development. Current data article represents whole transcriptome profiles of corneal endothelium obtained from 12 patients with FECD and 6 control tissues from eye bank donors. RNA sequencing data is available at NCBI Sequence Read Archive under Accession No. PRJNA524323. In addition, each patient and donor were genotyped for CTG18.1 expansion and the corresponding numbers of CTG repeats in the TCF4 gene are provided within this article. The dataset includes samples from FECD patients both with and without CTG18.1 expansion. Elsevier 2019-05-23 /pmc/articles/PMC6558234/ /pubmed/31205988 http://dx.doi.org/10.1016/j.dib.2019.104047 Text en © 2019 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Biochemistry, Genetics and Molecular Biology Nikitina, Anastasia S. Belodedova, Alexandra V. Malyugin, Boris E. Sharova, Elena I. Kostryukova, Elena S. Larin, Andrey K. Veselovsky, Vladimir A. Antonova, Olga P. Skorodumova, Liubov O. Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy |
title | Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy |
title_full | Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy |
title_fullStr | Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy |
title_full_unstemmed | Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy |
title_short | Dataset on transcriptome profiling of corneal endothelium from patients with Fuchs endothelial corneal dystrophy |
title_sort | dataset on transcriptome profiling of corneal endothelium from patients with fuchs endothelial corneal dystrophy |
topic | Biochemistry, Genetics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6558234/ https://www.ncbi.nlm.nih.gov/pubmed/31205988 http://dx.doi.org/10.1016/j.dib.2019.104047 |
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