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Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva

Metabolic profiling by (1)H NMR spectroscopy is an underutilized technology in salivary research, although preliminary studies have identified promising results in multiple fields (diagnostics, nutrition, sports physiology). Translation of preliminary findings into validated, clinically approved kno...

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Autores principales: Gardner, Alexander, Parkes, Harold G., Carpenter, Guy H., So, Po-Wah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6558279/
https://www.ncbi.nlm.nih.gov/pubmed/29498859
http://dx.doi.org/10.1021/acs.jproteome.7b00847
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author Gardner, Alexander
Parkes, Harold G.
Carpenter, Guy H.
So, Po-Wah
author_facet Gardner, Alexander
Parkes, Harold G.
Carpenter, Guy H.
So, Po-Wah
author_sort Gardner, Alexander
collection PubMed
description Metabolic profiling by (1)H NMR spectroscopy is an underutilized technology in salivary research, although preliminary studies have identified promising results in multiple fields (diagnostics, nutrition, sports physiology). Translation of preliminary findings into validated, clinically approved knowledge is hindered by variability in protocol for the collection, storage, preparation, and analysis of saliva. This study aims to evaluate the effects of differing sample pretreatments on the (1)H NMR metabolic profile of saliva. Protocol considerations are highly varied in the current literature base, including centrifugation, freeze−thaw cycles, and different NMR quantification methods. Our findings suggest that the (1)H NMR metabolite profile of saliva is resilient to any change resulting from freezing, including freezing of saliva prior to centrifuging. However, centrifugation was necessary to remove an unidentified broad peak between 1.24 and 1.3 ppm, the intensity of which correlated strongly with saliva cellular content. This peak obscured the methyl peak from lactate and significantly affected quantification. Metabolite quantification was similar for saliva centrifuged between 750g to 15 000g. Quantification of salivary metabolites was similar whether quantified using internal phosphate-buffered sodium trimethylsilyl-[2,2,3,3-(2)H(4)]-propionate (TSP) or external TSP in a coaxial NMR tube placed inside the NMR tube containing the saliva sample. Our results suggest that the existing literature on salivary (1)H NMR will not have been adversely affected by variations of the common protocol; however, use of TSP as an internal standard without a buffered medium appears to affect metabolite quantification, notably for acetate and methanol. We include protocol recommendations to facilitate future NMR-based studies of saliva.
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spelling pubmed-65582792019-06-11 Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva Gardner, Alexander Parkes, Harold G. Carpenter, Guy H. So, Po-Wah J Proteome Res Article Metabolic profiling by (1)H NMR spectroscopy is an underutilized technology in salivary research, although preliminary studies have identified promising results in multiple fields (diagnostics, nutrition, sports physiology). Translation of preliminary findings into validated, clinically approved knowledge is hindered by variability in protocol for the collection, storage, preparation, and analysis of saliva. This study aims to evaluate the effects of differing sample pretreatments on the (1)H NMR metabolic profile of saliva. Protocol considerations are highly varied in the current literature base, including centrifugation, freeze−thaw cycles, and different NMR quantification methods. Our findings suggest that the (1)H NMR metabolite profile of saliva is resilient to any change resulting from freezing, including freezing of saliva prior to centrifuging. However, centrifugation was necessary to remove an unidentified broad peak between 1.24 and 1.3 ppm, the intensity of which correlated strongly with saliva cellular content. This peak obscured the methyl peak from lactate and significantly affected quantification. Metabolite quantification was similar for saliva centrifuged between 750g to 15 000g. Quantification of salivary metabolites was similar whether quantified using internal phosphate-buffered sodium trimethylsilyl-[2,2,3,3-(2)H(4)]-propionate (TSP) or external TSP in a coaxial NMR tube placed inside the NMR tube containing the saliva sample. Our results suggest that the existing literature on salivary (1)H NMR will not have been adversely affected by variations of the common protocol; however, use of TSP as an internal standard without a buffered medium appears to affect metabolite quantification, notably for acetate and methanol. We include protocol recommendations to facilitate future NMR-based studies of saliva. 2018-04-06 2018-03-13 /pmc/articles/PMC6558279/ /pubmed/29498859 http://dx.doi.org/10.1021/acs.jproteome.7b00847 Text en http://creativecommons.org/licenses/by/4.0/ This is an open access article published under a Creative Commons Attribution (CC-BY) License (https://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Article
Gardner, Alexander
Parkes, Harold G.
Carpenter, Guy H.
So, Po-Wah
Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva
title Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva
title_full Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva
title_fullStr Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva
title_full_unstemmed Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva
title_short Developing and Standardizing a Protocol for Quantitative Proton Nuclear Magnetic Resonance ((1)H NMR) Spectroscopy of Saliva
title_sort developing and standardizing a protocol for quantitative proton nuclear magnetic resonance ((1)h nmr) spectroscopy of saliva
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6558279/
https://www.ncbi.nlm.nih.gov/pubmed/29498859
http://dx.doi.org/10.1021/acs.jproteome.7b00847
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