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A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens

International travel offers an extensive network for new and recurring human-mediated introductions of exotic infectious pathogens and biota, freeing geographical constraints. We present a predictive census-travel model that integrates international travel with endpoint census data and epidemiologic...

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Autores principales: Gottwald, Tim, Luo, Weiqi, Posny, Drew, Riley, Tim, Louws, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6558561/
https://www.ncbi.nlm.nih.gov/pubmed/31104596
http://dx.doi.org/10.1098/rstb.2018.0260
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author Gottwald, Tim
Luo, Weiqi
Posny, Drew
Riley, Tim
Louws, Frank
author_facet Gottwald, Tim
Luo, Weiqi
Posny, Drew
Riley, Tim
Louws, Frank
author_sort Gottwald, Tim
collection PubMed
description International travel offers an extensive network for new and recurring human-mediated introductions of exotic infectious pathogens and biota, freeing geographical constraints. We present a predictive census-travel model that integrates international travel with endpoint census data and epidemiological characteristics to predict points of introduction. Population demographics, inbound and outbound travel patterns, and quantification of source strength by country are combined to estimate and rank risk of introduction at user-scalable land parcel areas (e.g. state, county, zip code, census tract, gridded landscapes (1 mi(2), 5 km(2), etc.)). This risk ranking by parcel can be used to develop pathogen surveillance programmes, and has been incorporated in multiple US state/federal surveillance protocols. The census-travel model is versatile and independent of pathosystems, and applies a risk algorithm to generate risk maps for plant, human and animal contagions at different spatial scales. An interactive, user-friendly interface is available online (https://epi-models.shinyapps.io/Census_Travel/) to provide ease-of-use for regulatory agencies for early detection of high-risk exotics. The interface allows users to parametrize and run the model without knowledge of background code and underpinning data. This article is part of the theme issue ‘Modelling infectious disease outbreaks in humans, animals and plants: epidemic forecasting and control’. This theme issue is linked with the earlier issue ‘Modelling infectious disease outbreaks in humans, animals and plants: approaches and important themes’.
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spelling pubmed-65585612019-06-26 A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens Gottwald, Tim Luo, Weiqi Posny, Drew Riley, Tim Louws, Frank Philos Trans R Soc Lond B Biol Sci Articles International travel offers an extensive network for new and recurring human-mediated introductions of exotic infectious pathogens and biota, freeing geographical constraints. We present a predictive census-travel model that integrates international travel with endpoint census data and epidemiological characteristics to predict points of introduction. Population demographics, inbound and outbound travel patterns, and quantification of source strength by country are combined to estimate and rank risk of introduction at user-scalable land parcel areas (e.g. state, county, zip code, census tract, gridded landscapes (1 mi(2), 5 km(2), etc.)). This risk ranking by parcel can be used to develop pathogen surveillance programmes, and has been incorporated in multiple US state/federal surveillance protocols. The census-travel model is versatile and independent of pathosystems, and applies a risk algorithm to generate risk maps for plant, human and animal contagions at different spatial scales. An interactive, user-friendly interface is available online (https://epi-models.shinyapps.io/Census_Travel/) to provide ease-of-use for regulatory agencies for early detection of high-risk exotics. The interface allows users to parametrize and run the model without knowledge of background code and underpinning data. This article is part of the theme issue ‘Modelling infectious disease outbreaks in humans, animals and plants: epidemic forecasting and control’. This theme issue is linked with the earlier issue ‘Modelling infectious disease outbreaks in humans, animals and plants: approaches and important themes’. The Royal Society 2019-07-08 2019-05-20 /pmc/articles/PMC6558561/ /pubmed/31104596 http://dx.doi.org/10.1098/rstb.2018.0260 Text en © 2019 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Articles
Gottwald, Tim
Luo, Weiqi
Posny, Drew
Riley, Tim
Louws, Frank
A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
title A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
title_full A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
title_fullStr A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
title_full_unstemmed A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
title_short A probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
title_sort probabilistic census-travel model to predict introduction sites of exotic plant, animal and human pathogens
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6558561/
https://www.ncbi.nlm.nih.gov/pubmed/31104596
http://dx.doi.org/10.1098/rstb.2018.0260
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