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High throughput method for measuring urease activity in soil
Extracellular enzymes break down soil organic matter into smaller compounds and their measurement has proved to be a powerful tool to evaluate the functionality of soils. Urease is the enzyme that degrades urea and is widely considered to be a good proxy of nitrogen (N) mineralisation. But the metho...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6559327/ https://www.ncbi.nlm.nih.gov/pubmed/31274933 http://dx.doi.org/10.1016/j.soilbio.2019.03.014 |
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author | Cordero, Irene Snell, Helen Bardgett, Richard D. |
author_facet | Cordero, Irene Snell, Helen Bardgett, Richard D. |
author_sort | Cordero, Irene |
collection | PubMed |
description | Extracellular enzymes break down soil organic matter into smaller compounds and their measurement has proved to be a powerful tool to evaluate the functionality of soils. Urease is the enzyme that degrades urea and is widely considered to be a good proxy of nitrogen (N) mineralisation. But the methods available to measure this enzyme are time consuming; as such, urease is not commonly included in standard enzyme profiling of soils. We developed a fast, high throughput and reproducible colorimetric microplate technique to evaluate urease activity in soil. The method involves the incubation of soil slurries in 96-deepwell blocks with urea solutions and the measurement, by colorimetric reaction, of ammonium produced. We compared the new method with existing methods, yielding comparable results, and evaluated optimal conditions for urease analysis (soil slurry concentration, substrate concentration, incubation times and extractant salt concentration) in different grassland soils. The method proved to be a faster, higher throughput, and more precise alternative to existing methods for evaluating this important N-related enzyme. |
format | Online Article Text |
id | pubmed-6559327 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-65593272019-07-01 High throughput method for measuring urease activity in soil Cordero, Irene Snell, Helen Bardgett, Richard D. Soil Biol Biochem Article Extracellular enzymes break down soil organic matter into smaller compounds and their measurement has proved to be a powerful tool to evaluate the functionality of soils. Urease is the enzyme that degrades urea and is widely considered to be a good proxy of nitrogen (N) mineralisation. But the methods available to measure this enzyme are time consuming; as such, urease is not commonly included in standard enzyme profiling of soils. We developed a fast, high throughput and reproducible colorimetric microplate technique to evaluate urease activity in soil. The method involves the incubation of soil slurries in 96-deepwell blocks with urea solutions and the measurement, by colorimetric reaction, of ammonium produced. We compared the new method with existing methods, yielding comparable results, and evaluated optimal conditions for urease analysis (soil slurry concentration, substrate concentration, incubation times and extractant salt concentration) in different grassland soils. The method proved to be a faster, higher throughput, and more precise alternative to existing methods for evaluating this important N-related enzyme. Elsevier 2019-07 /pmc/articles/PMC6559327/ /pubmed/31274933 http://dx.doi.org/10.1016/j.soilbio.2019.03.014 Text en Crown Copyright © Published by Elsevier Ltd. All rights reserved. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Cordero, Irene Snell, Helen Bardgett, Richard D. High throughput method for measuring urease activity in soil |
title | High throughput method for measuring urease activity in soil |
title_full | High throughput method for measuring urease activity in soil |
title_fullStr | High throughput method for measuring urease activity in soil |
title_full_unstemmed | High throughput method for measuring urease activity in soil |
title_short | High throughput method for measuring urease activity in soil |
title_sort | high throughput method for measuring urease activity in soil |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6559327/ https://www.ncbi.nlm.nih.gov/pubmed/31274933 http://dx.doi.org/10.1016/j.soilbio.2019.03.014 |
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