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Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules
Pulmonary nodules are frequently detected radiological abnormalities in lung cancer screening. Nodules of the highest- and lowest-risk for cancer are often easily diagnosed by a trained radiologist there is still a high rate of indeterminate pulmonary nodules (IPN) of unknown risk. Here, we test the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6561979/ https://www.ncbi.nlm.nih.gov/pubmed/31189944 http://dx.doi.org/10.1038/s41598-019-44562-z |
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author | Balagurunathan, Yoganand Schabath, Matthew B. Wang, Hua Liu, Ying Gillies, Robert J. |
author_facet | Balagurunathan, Yoganand Schabath, Matthew B. Wang, Hua Liu, Ying Gillies, Robert J. |
author_sort | Balagurunathan, Yoganand |
collection | PubMed |
description | Pulmonary nodules are frequently detected radiological abnormalities in lung cancer screening. Nodules of the highest- and lowest-risk for cancer are often easily diagnosed by a trained radiologist there is still a high rate of indeterminate pulmonary nodules (IPN) of unknown risk. Here, we test the hypothesis that computer extracted quantitative features (“radiomics”) can provide improved risk-assessment in the diagnostic setting. Nodules were segmented in 3D and 219 quantitative features are extracted from these volumes. Using these features novel malignancy risk predictors are formed with various stratifications based on size, shape and texture feature categories. We used images and data from the National Lung Screening Trial (NLST), curated a subset of 479 participants (244 for training and 235 for testing) that included incident lung cancers and nodule-positive controls. After removing redundant and non-reproducible features, optimal linear classifiers with area under the receiver operator characteristics (AUROC) curves were used with an exhaustive search approach to find a discriminant set of image features, which were validated in an independent test dataset. We identified several strong predictive models, using size and shape features the highest AUROC was 0.80. Using non-size based features the highest AUROC was 0.85. Combining features from all the categories, the highest AUROC were 0.83. |
format | Online Article Text |
id | pubmed-6561979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65619792019-06-20 Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules Balagurunathan, Yoganand Schabath, Matthew B. Wang, Hua Liu, Ying Gillies, Robert J. Sci Rep Article Pulmonary nodules are frequently detected radiological abnormalities in lung cancer screening. Nodules of the highest- and lowest-risk for cancer are often easily diagnosed by a trained radiologist there is still a high rate of indeterminate pulmonary nodules (IPN) of unknown risk. Here, we test the hypothesis that computer extracted quantitative features (“radiomics”) can provide improved risk-assessment in the diagnostic setting. Nodules were segmented in 3D and 219 quantitative features are extracted from these volumes. Using these features novel malignancy risk predictors are formed with various stratifications based on size, shape and texture feature categories. We used images and data from the National Lung Screening Trial (NLST), curated a subset of 479 participants (244 for training and 235 for testing) that included incident lung cancers and nodule-positive controls. After removing redundant and non-reproducible features, optimal linear classifiers with area under the receiver operator characteristics (AUROC) curves were used with an exhaustive search approach to find a discriminant set of image features, which were validated in an independent test dataset. We identified several strong predictive models, using size and shape features the highest AUROC was 0.80. Using non-size based features the highest AUROC was 0.85. Combining features from all the categories, the highest AUROC were 0.83. Nature Publishing Group UK 2019-06-12 /pmc/articles/PMC6561979/ /pubmed/31189944 http://dx.doi.org/10.1038/s41598-019-44562-z Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Balagurunathan, Yoganand Schabath, Matthew B. Wang, Hua Liu, Ying Gillies, Robert J. Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules |
title | Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules |
title_full | Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules |
title_fullStr | Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules |
title_full_unstemmed | Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules |
title_short | Quantitative Imaging features Improve Discrimination of Malignancy in Pulmonary nodules |
title_sort | quantitative imaging features improve discrimination of malignancy in pulmonary nodules |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6561979/ https://www.ncbi.nlm.nih.gov/pubmed/31189944 http://dx.doi.org/10.1038/s41598-019-44562-z |
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