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The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T
PURPOSE: Inhomogeneities in the static magnetic field (B (0)) deteriorate MRSI data quality by lowering the spectral resolution and SNR. MRSI with low spatial resolution is also prone to lipid bleeding. These problems are increasingly problematic at ultra‐high fields. An approach to tackling these c...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563461/ https://www.ncbi.nlm.nih.gov/pubmed/30932248 http://dx.doi.org/10.1002/mrm.27746 |
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author | Motyka, Stanislav Moser, Philipp Hingerl, Lukas Hangel, Gilbert Heckova, Eva Strasser, Bernhard Eckstein, Korbinian Daniel Robinson, Simon Poser, Benedikt A. Gruber, Stephan Trattnig, Siegfried Bogner, Wolfgang |
author_facet | Motyka, Stanislav Moser, Philipp Hingerl, Lukas Hangel, Gilbert Heckova, Eva Strasser, Bernhard Eckstein, Korbinian Daniel Robinson, Simon Poser, Benedikt A. Gruber, Stephan Trattnig, Siegfried Bogner, Wolfgang |
author_sort | Motyka, Stanislav |
collection | PubMed |
description | PURPOSE: Inhomogeneities in the static magnetic field (B (0)) deteriorate MRSI data quality by lowering the spectral resolution and SNR. MRSI with low spatial resolution is also prone to lipid bleeding. These problems are increasingly problematic at ultra‐high fields. An approach to tackling these challenges independent of B (0)‐shim hardware is to increase the spatial resolution. Therefore, we investigated the effect of improved spatial resolution on spectral quality and quantification at 4 field strengths. METHODS: Whole‐brain MRSI data was simulated for 3 spatial resolutions and 4 B (0)s based on experimentally acquired MRI data and simulated free induction decay signals of metabolites and lipids. To compare the spectral quality and quantification, we derived SNR normalized to the voxel size (nSNR), linewidth and metabolite concentration ratios, their Cramer‐Rao‐lower‐bounds (CRLBs), and the absolute percentage error (APE) of estimated concentrations compared to the gold standard for the whole‐brain and 8 brain regions. RESULTS: At 7T, we found up to a 3.4‐fold improved nSNR (in the frontal lobe) and a 2.8‐fold reduced linewidth (in the temporal lobe) for 1 cm(3) versus 0.25 cm(3) resolution. This effect was much more pronounced at higher and less homogenous B (0) (1.6‐fold improved nSNR and 1.8‐fold improved linewidth in the parietal lobe at 3T). This had direct implications for quantification: the volume of reliably quantified spectra increased with resolution by 1.2‐fold and 1.5‐fold (when thresholded by CRLBs or APE, respectively). CONCLUSION: MRSI data quality benefits from increased spatial resolution particularly at higher B (0), and leads to more reliable metabolite quantification. In conjunction with the development of better B (0) shimming hardware, this will enable robust whole‐brain MRSI at ultra‐high field. |
format | Online Article Text |
id | pubmed-6563461 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65634612019-06-17 The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T Motyka, Stanislav Moser, Philipp Hingerl, Lukas Hangel, Gilbert Heckova, Eva Strasser, Bernhard Eckstein, Korbinian Daniel Robinson, Simon Poser, Benedikt A. Gruber, Stephan Trattnig, Siegfried Bogner, Wolfgang Magn Reson Med Full Paper—Spectroscopic Methodology PURPOSE: Inhomogeneities in the static magnetic field (B (0)) deteriorate MRSI data quality by lowering the spectral resolution and SNR. MRSI with low spatial resolution is also prone to lipid bleeding. These problems are increasingly problematic at ultra‐high fields. An approach to tackling these challenges independent of B (0)‐shim hardware is to increase the spatial resolution. Therefore, we investigated the effect of improved spatial resolution on spectral quality and quantification at 4 field strengths. METHODS: Whole‐brain MRSI data was simulated for 3 spatial resolutions and 4 B (0)s based on experimentally acquired MRI data and simulated free induction decay signals of metabolites and lipids. To compare the spectral quality and quantification, we derived SNR normalized to the voxel size (nSNR), linewidth and metabolite concentration ratios, their Cramer‐Rao‐lower‐bounds (CRLBs), and the absolute percentage error (APE) of estimated concentrations compared to the gold standard for the whole‐brain and 8 brain regions. RESULTS: At 7T, we found up to a 3.4‐fold improved nSNR (in the frontal lobe) and a 2.8‐fold reduced linewidth (in the temporal lobe) for 1 cm(3) versus 0.25 cm(3) resolution. This effect was much more pronounced at higher and less homogenous B (0) (1.6‐fold improved nSNR and 1.8‐fold improved linewidth in the parietal lobe at 3T). This had direct implications for quantification: the volume of reliably quantified spectra increased with resolution by 1.2‐fold and 1.5‐fold (when thresholded by CRLBs or APE, respectively). CONCLUSION: MRSI data quality benefits from increased spatial resolution particularly at higher B (0), and leads to more reliable metabolite quantification. In conjunction with the development of better B (0) shimming hardware, this will enable robust whole‐brain MRSI at ultra‐high field. John Wiley and Sons Inc. 2019-04-01 2019-08 /pmc/articles/PMC6563461/ /pubmed/30932248 http://dx.doi.org/10.1002/mrm.27746 Text en © 2019 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Paper—Spectroscopic Methodology Motyka, Stanislav Moser, Philipp Hingerl, Lukas Hangel, Gilbert Heckova, Eva Strasser, Bernhard Eckstein, Korbinian Daniel Robinson, Simon Poser, Benedikt A. Gruber, Stephan Trattnig, Siegfried Bogner, Wolfgang The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T |
title | The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T |
title_full | The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T |
title_fullStr | The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T |
title_full_unstemmed | The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T |
title_short | The influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain MRSI at 1.5T, 3T, 7T, and 9.4T |
title_sort | influence of spatial resolution on the spectral quality and quantification accuracy of whole‐brain mrsi at 1.5t, 3t, 7t, and 9.4t |
topic | Full Paper—Spectroscopic Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563461/ https://www.ncbi.nlm.nih.gov/pubmed/30932248 http://dx.doi.org/10.1002/mrm.27746 |
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