Cargando…

Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors

Bioinformatics has become an indispensable part of life science over the past 2 decades. However, bioinformatics education is not well integrated at the undergraduate level, especially in liberal arts colleges and regional universities in the United States. One significant obstacle pointed out by th...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhan, Yingqian Ada, Wray, Charles Gregory, Namburi, Sandeep, Glantz, Spencer T., Laubenbacher, Reinhard, Chuang, Jeffrey H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563947/
https://www.ncbi.nlm.nih.gov/pubmed/31194735
http://dx.doi.org/10.1371/journal.pcbi.1007026
_version_ 1783426623121391616
author Zhan, Yingqian Ada
Wray, Charles Gregory
Namburi, Sandeep
Glantz, Spencer T.
Laubenbacher, Reinhard
Chuang, Jeffrey H.
author_facet Zhan, Yingqian Ada
Wray, Charles Gregory
Namburi, Sandeep
Glantz, Spencer T.
Laubenbacher, Reinhard
Chuang, Jeffrey H.
author_sort Zhan, Yingqian Ada
collection PubMed
description Bioinformatics has become an indispensable part of life science over the past 2 decades. However, bioinformatics education is not well integrated at the undergraduate level, especially in liberal arts colleges and regional universities in the United States. One significant obstacle pointed out by the Network for Integrating Bioinformatics into Life Sciences Education is the lack of faculty in the bioinformatics area. Most current life science professors did not acquire bioinformatics analysis skills during their own training. Consequently, a great number of undergraduate and graduate students do not get the chance to learn bioinformatics or computational biology skills within a structured curriculum during their education. To address this gap, we developed a module-based, week-long short course to train small college and regional university professors with essential bioinformatics skills. The bioinformatics modules were built to be adapted by the professor-trainees afterward and used in their own classes. All the course materials can be accessed at https://github.com/TheJacksonLaboratory/JAXBD2K-ShortCourse.
format Online
Article
Text
id pubmed-6563947
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-65639472019-06-20 Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors Zhan, Yingqian Ada Wray, Charles Gregory Namburi, Sandeep Glantz, Spencer T. Laubenbacher, Reinhard Chuang, Jeffrey H. PLoS Comput Biol Education Bioinformatics has become an indispensable part of life science over the past 2 decades. However, bioinformatics education is not well integrated at the undergraduate level, especially in liberal arts colleges and regional universities in the United States. One significant obstacle pointed out by the Network for Integrating Bioinformatics into Life Sciences Education is the lack of faculty in the bioinformatics area. Most current life science professors did not acquire bioinformatics analysis skills during their own training. Consequently, a great number of undergraduate and graduate students do not get the chance to learn bioinformatics or computational biology skills within a structured curriculum during their education. To address this gap, we developed a module-based, week-long short course to train small college and regional university professors with essential bioinformatics skills. The bioinformatics modules were built to be adapted by the professor-trainees afterward and used in their own classes. All the course materials can be accessed at https://github.com/TheJacksonLaboratory/JAXBD2K-ShortCourse. Public Library of Science 2019-06-13 /pmc/articles/PMC6563947/ /pubmed/31194735 http://dx.doi.org/10.1371/journal.pcbi.1007026 Text en © 2019 Zhan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Education
Zhan, Yingqian Ada
Wray, Charles Gregory
Namburi, Sandeep
Glantz, Spencer T.
Laubenbacher, Reinhard
Chuang, Jeffrey H.
Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors
title Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors
title_full Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors
title_fullStr Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors
title_full_unstemmed Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors
title_short Fostering bioinformatics education through skill development of professors: Big Genomic Data Skills Training for Professors
title_sort fostering bioinformatics education through skill development of professors: big genomic data skills training for professors
topic Education
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563947/
https://www.ncbi.nlm.nih.gov/pubmed/31194735
http://dx.doi.org/10.1371/journal.pcbi.1007026
work_keys_str_mv AT zhanyingqianada fosteringbioinformaticseducationthroughskilldevelopmentofprofessorsbiggenomicdataskillstrainingforprofessors
AT wraycharlesgregory fosteringbioinformaticseducationthroughskilldevelopmentofprofessorsbiggenomicdataskillstrainingforprofessors
AT namburisandeep fosteringbioinformaticseducationthroughskilldevelopmentofprofessorsbiggenomicdataskillstrainingforprofessors
AT glantzspencert fosteringbioinformaticseducationthroughskilldevelopmentofprofessorsbiggenomicdataskillstrainingforprofessors
AT laubenbacherreinhard fosteringbioinformaticseducationthroughskilldevelopmentofprofessorsbiggenomicdataskillstrainingforprofessors
AT chuangjeffreyh fosteringbioinformaticseducationthroughskilldevelopmentofprofessorsbiggenomicdataskillstrainingforprofessors