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Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models

The blooms of Noctiluca in the Gulf of Oman and the Arabian Sea have been intensifying in recent years, posing now a threat to regional fisheries and the long-term health of an ecosystem supporting a coastal population of nearly 120 million people. We present the results of a local-scale data analys...

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Autores principales: Yan, Yan, Jebara, Tony, Abernathey, Ryan, Goes, Joaquim, Gomes, Helga
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6564007/
https://www.ncbi.nlm.nih.gov/pubmed/31194825
http://dx.doi.org/10.1371/journal.pone.0218183
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author Yan, Yan
Jebara, Tony
Abernathey, Ryan
Goes, Joaquim
Gomes, Helga
author_facet Yan, Yan
Jebara, Tony
Abernathey, Ryan
Goes, Joaquim
Gomes, Helga
author_sort Yan, Yan
collection PubMed
description The blooms of Noctiluca in the Gulf of Oman and the Arabian Sea have been intensifying in recent years, posing now a threat to regional fisheries and the long-term health of an ecosystem supporting a coastal population of nearly 120 million people. We present the results of a local-scale data analysis to investigate the onset and patterns of the Noctiluca blooms, which form annually during the winter monsoon in the Gulf of Oman and in the Arabian Sea. Our approach combines methods in physical and biological oceanography with machine learning techniques. In particular, we present a robust algorithm, the variable-length Linear Dynamic Systems (vLDS) model, that extracts the causal factors and latent dynamics at the local-scale along each individual drifter trajectory, and demonstrate its effectiveness by using it to generate predictive plots for all variables and test macroscopic scientific hypotheses. The vLDS model is a new algorithm specifically designed to analyze the irregular dataset from surface velocity drifters, in which the multivariate time series trajectories are having variable or unequal lengths. The test results provide local-scale statistical evidence to support and check the macroscopic physical and biological Oceanography hypotheses on the Noctiluca blooms; it also helps identify complementary local trajectory-scale dynamics that might not be visible or discoverable at the macroscopic scale. The vLDS model also exhibits a generalization capability (as a machine learning methodology) to investigate important causal factors and hidden dynamics associated with ocean biogeochemical processes and phenomena at the population-level and local trajectory-scale.
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spelling pubmed-65640072019-06-20 Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models Yan, Yan Jebara, Tony Abernathey, Ryan Goes, Joaquim Gomes, Helga PLoS One Research Article The blooms of Noctiluca in the Gulf of Oman and the Arabian Sea have been intensifying in recent years, posing now a threat to regional fisheries and the long-term health of an ecosystem supporting a coastal population of nearly 120 million people. We present the results of a local-scale data analysis to investigate the onset and patterns of the Noctiluca blooms, which form annually during the winter monsoon in the Gulf of Oman and in the Arabian Sea. Our approach combines methods in physical and biological oceanography with machine learning techniques. In particular, we present a robust algorithm, the variable-length Linear Dynamic Systems (vLDS) model, that extracts the causal factors and latent dynamics at the local-scale along each individual drifter trajectory, and demonstrate its effectiveness by using it to generate predictive plots for all variables and test macroscopic scientific hypotheses. The vLDS model is a new algorithm specifically designed to analyze the irregular dataset from surface velocity drifters, in which the multivariate time series trajectories are having variable or unequal lengths. The test results provide local-scale statistical evidence to support and check the macroscopic physical and biological Oceanography hypotheses on the Noctiluca blooms; it also helps identify complementary local trajectory-scale dynamics that might not be visible or discoverable at the macroscopic scale. The vLDS model also exhibits a generalization capability (as a machine learning methodology) to investigate important causal factors and hidden dynamics associated with ocean biogeochemical processes and phenomena at the population-level and local trajectory-scale. Public Library of Science 2019-06-13 /pmc/articles/PMC6564007/ /pubmed/31194825 http://dx.doi.org/10.1371/journal.pone.0218183 Text en © 2019 Yan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Yan, Yan
Jebara, Tony
Abernathey, Ryan
Goes, Joaquim
Gomes, Helga
Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
title Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
title_full Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
title_fullStr Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
title_full_unstemmed Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
title_short Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
title_sort robust learning algorithms for capturing oceanic dynamics and transport of noctiluca blooms using linear dynamical models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6564007/
https://www.ncbi.nlm.nih.gov/pubmed/31194825
http://dx.doi.org/10.1371/journal.pone.0218183
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