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Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models
The blooms of Noctiluca in the Gulf of Oman and the Arabian Sea have been intensifying in recent years, posing now a threat to regional fisheries and the long-term health of an ecosystem supporting a coastal population of nearly 120 million people. We present the results of a local-scale data analys...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6564007/ https://www.ncbi.nlm.nih.gov/pubmed/31194825 http://dx.doi.org/10.1371/journal.pone.0218183 |
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author | Yan, Yan Jebara, Tony Abernathey, Ryan Goes, Joaquim Gomes, Helga |
author_facet | Yan, Yan Jebara, Tony Abernathey, Ryan Goes, Joaquim Gomes, Helga |
author_sort | Yan, Yan |
collection | PubMed |
description | The blooms of Noctiluca in the Gulf of Oman and the Arabian Sea have been intensifying in recent years, posing now a threat to regional fisheries and the long-term health of an ecosystem supporting a coastal population of nearly 120 million people. We present the results of a local-scale data analysis to investigate the onset and patterns of the Noctiluca blooms, which form annually during the winter monsoon in the Gulf of Oman and in the Arabian Sea. Our approach combines methods in physical and biological oceanography with machine learning techniques. In particular, we present a robust algorithm, the variable-length Linear Dynamic Systems (vLDS) model, that extracts the causal factors and latent dynamics at the local-scale along each individual drifter trajectory, and demonstrate its effectiveness by using it to generate predictive plots for all variables and test macroscopic scientific hypotheses. The vLDS model is a new algorithm specifically designed to analyze the irregular dataset from surface velocity drifters, in which the multivariate time series trajectories are having variable or unequal lengths. The test results provide local-scale statistical evidence to support and check the macroscopic physical and biological Oceanography hypotheses on the Noctiluca blooms; it also helps identify complementary local trajectory-scale dynamics that might not be visible or discoverable at the macroscopic scale. The vLDS model also exhibits a generalization capability (as a machine learning methodology) to investigate important causal factors and hidden dynamics associated with ocean biogeochemical processes and phenomena at the population-level and local trajectory-scale. |
format | Online Article Text |
id | pubmed-6564007 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-65640072019-06-20 Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models Yan, Yan Jebara, Tony Abernathey, Ryan Goes, Joaquim Gomes, Helga PLoS One Research Article The blooms of Noctiluca in the Gulf of Oman and the Arabian Sea have been intensifying in recent years, posing now a threat to regional fisheries and the long-term health of an ecosystem supporting a coastal population of nearly 120 million people. We present the results of a local-scale data analysis to investigate the onset and patterns of the Noctiluca blooms, which form annually during the winter monsoon in the Gulf of Oman and in the Arabian Sea. Our approach combines methods in physical and biological oceanography with machine learning techniques. In particular, we present a robust algorithm, the variable-length Linear Dynamic Systems (vLDS) model, that extracts the causal factors and latent dynamics at the local-scale along each individual drifter trajectory, and demonstrate its effectiveness by using it to generate predictive plots for all variables and test macroscopic scientific hypotheses. The vLDS model is a new algorithm specifically designed to analyze the irregular dataset from surface velocity drifters, in which the multivariate time series trajectories are having variable or unequal lengths. The test results provide local-scale statistical evidence to support and check the macroscopic physical and biological Oceanography hypotheses on the Noctiluca blooms; it also helps identify complementary local trajectory-scale dynamics that might not be visible or discoverable at the macroscopic scale. The vLDS model also exhibits a generalization capability (as a machine learning methodology) to investigate important causal factors and hidden dynamics associated with ocean biogeochemical processes and phenomena at the population-level and local trajectory-scale. Public Library of Science 2019-06-13 /pmc/articles/PMC6564007/ /pubmed/31194825 http://dx.doi.org/10.1371/journal.pone.0218183 Text en © 2019 Yan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Yan, Yan Jebara, Tony Abernathey, Ryan Goes, Joaquim Gomes, Helga Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models |
title | Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models |
title_full | Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models |
title_fullStr | Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models |
title_full_unstemmed | Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models |
title_short | Robust learning algorithms for capturing oceanic dynamics and transport of Noctiluca blooms using linear dynamical models |
title_sort | robust learning algorithms for capturing oceanic dynamics and transport of noctiluca blooms using linear dynamical models |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6564007/ https://www.ncbi.nlm.nih.gov/pubmed/31194825 http://dx.doi.org/10.1371/journal.pone.0218183 |
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