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Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology

BACKGROUND: Polycystic kidney disease (PKD) is the most common hereditary kidney disease. The main mutational genes causing autosomal dominant polycystic kidney disease (ADPKD) are PKD1 and PKD2 as well as some rare pathogenic genes. Unilateral PKD is rare in clinics, and its association with gene m...

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Autores principales: Wang, Tao, Li, Qinggang, Shang, Shunlai, Geng, Guangrui, Xie, Yuansheng, Cai, Guangyan, Chen, Xiangmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6565597/
https://www.ncbi.nlm.nih.gov/pubmed/31056860
http://dx.doi.org/10.1002/mgg3.720
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author Wang, Tao
Li, Qinggang
Shang, Shunlai
Geng, Guangrui
Xie, Yuansheng
Cai, Guangyan
Chen, Xiangmei
author_facet Wang, Tao
Li, Qinggang
Shang, Shunlai
Geng, Guangrui
Xie, Yuansheng
Cai, Guangyan
Chen, Xiangmei
author_sort Wang, Tao
collection PubMed
description BACKGROUND: Polycystic kidney disease (PKD) is the most common hereditary kidney disease. The main mutational genes causing autosomal dominant polycystic kidney disease (ADPKD) are PKD1 and PKD2 as well as some rare pathogenic genes. Unilateral PKD is rare in clinics, and its association with gene mutations is unclear. METHODS: Targeted next‐generation sequencing (NGS) was performed to detect the renal ciliopathy‐associated genes (targeted NGS panel including 63 genes) in PKD patients. RESULTS: Forty‐eight PKD1 and PKD2 mutation sites were detected in 44 bilateral PKD patients, of which 48 were PKD1 mutation sites (87.5%) and six were PKD2 mutation sites (12.5%). All of which exhibited typical ADPKD. Furthermore, we detected HNF1B heterozygous mutations in three families. Although these three patients showed HNF1B heterozygous mutations, their clinical characteristics differed and showed phenotypic heterogeneity. CONCLUSIONS: Targeted NGS panel was helpful in detecting typical ADPKD patients and even in non‐typical PKD patients. Macromutation in HNF1B may lead to bilateral PKD. The 16 novel PKD gene mutation sites and two novel PKD2 gene mutation sites discovered in this study have some significance in genetic counseling for ADPKD patients, and increase the number of studied families and expand the mutation database of ADPKD.
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spelling pubmed-65655972019-06-20 Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology Wang, Tao Li, Qinggang Shang, Shunlai Geng, Guangrui Xie, Yuansheng Cai, Guangyan Chen, Xiangmei Mol Genet Genomic Med Original Articles BACKGROUND: Polycystic kidney disease (PKD) is the most common hereditary kidney disease. The main mutational genes causing autosomal dominant polycystic kidney disease (ADPKD) are PKD1 and PKD2 as well as some rare pathogenic genes. Unilateral PKD is rare in clinics, and its association with gene mutations is unclear. METHODS: Targeted next‐generation sequencing (NGS) was performed to detect the renal ciliopathy‐associated genes (targeted NGS panel including 63 genes) in PKD patients. RESULTS: Forty‐eight PKD1 and PKD2 mutation sites were detected in 44 bilateral PKD patients, of which 48 were PKD1 mutation sites (87.5%) and six were PKD2 mutation sites (12.5%). All of which exhibited typical ADPKD. Furthermore, we detected HNF1B heterozygous mutations in three families. Although these three patients showed HNF1B heterozygous mutations, their clinical characteristics differed and showed phenotypic heterogeneity. CONCLUSIONS: Targeted NGS panel was helpful in detecting typical ADPKD patients and even in non‐typical PKD patients. Macromutation in HNF1B may lead to bilateral PKD. The 16 novel PKD gene mutation sites and two novel PKD2 gene mutation sites discovered in this study have some significance in genetic counseling for ADPKD patients, and increase the number of studied families and expand the mutation database of ADPKD. John Wiley and Sons Inc. 2019-05-06 /pmc/articles/PMC6565597/ /pubmed/31056860 http://dx.doi.org/10.1002/mgg3.720 Text en © 2019 Chinese PLA General Hospital, Department of Nephrology. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Wang, Tao
Li, Qinggang
Shang, Shunlai
Geng, Guangrui
Xie, Yuansheng
Cai, Guangyan
Chen, Xiangmei
Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
title Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
title_full Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
title_fullStr Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
title_full_unstemmed Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
title_short Identifying gene mutations of Chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
title_sort identifying gene mutations of chinese patients with polycystic kidney disease through targeted next‐generation sequencing technology
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6565597/
https://www.ncbi.nlm.nih.gov/pubmed/31056860
http://dx.doi.org/10.1002/mgg3.720
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