Cargando…

What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum

The Japanese otter (Lutra nippon), once inhabited in most islands of Japan, is now considered as an extinct species. Although the Japanese otter is regarded as a distinct species from the Eurasian otter (L. lutra), its phylogeny and taxonomic status are based on limited information on morphological...

Descripción completa

Detalles Bibliográficos
Autores principales: Park, Han-Chan, Kurihara, Nozomi, Kim, Kyung Seok, Min, Mi-Sook, Han, Sungyong, Lee, Hang, Kimura, Junpei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6567078/
https://www.ncbi.nlm.nih.gov/pubmed/31231587
http://dx.doi.org/10.1080/19768354.2019.1601133
_version_ 1783426993774133248
author Park, Han-Chan
Kurihara, Nozomi
Kim, Kyung Seok
Min, Mi-Sook
Han, Sungyong
Lee, Hang
Kimura, Junpei
author_facet Park, Han-Chan
Kurihara, Nozomi
Kim, Kyung Seok
Min, Mi-Sook
Han, Sungyong
Lee, Hang
Kimura, Junpei
author_sort Park, Han-Chan
collection PubMed
description The Japanese otter (Lutra nippon), once inhabited in most islands of Japan, is now considered as an extinct species. Although the Japanese otter is regarded as a distinct species from the Eurasian otter (L. lutra), its phylogeny and taxonomic status are based on limited information on morphological and genetic data, and thus further clarification is required. Here, we assessed the phylogenetic relationship among the genus Lutra and taxonomic status of L. nippon by using the complete sequences of cytochrome b gene of its holotype. The present phylogenic trees supported that the genus Lutra specimens largely formed monophyletic group, with L. sumatrana as a basal to other Lutra species. Within Lutra species, L. nippon was distantly related with L. lutra. The European otter population of L. l. lutra were clustered together with its subspecies, L. l. chinensis rather than the same subspecies, Korean otter population. The discrepancy between the genetic data and traditional taxonomy justifies the necessity of reexamination of the current subspecific classification system of Eurasian otters. Level of genetic divergence between the holotype of L. nippon and L. lutra was two to three-fold lower than those among the other sister species of the Lutrinae. Based on the level of divergence between the L. nippon and L. lutra, and insufficient evidence of morphological difference between them, it is suggested that designation of Japanese otter as a separate species from L. lutra will be reconsidered.
format Online
Article
Text
id pubmed-6567078
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-65670782019-06-21 What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum Park, Han-Chan Kurihara, Nozomi Kim, Kyung Seok Min, Mi-Sook Han, Sungyong Lee, Hang Kimura, Junpei Anim Cells Syst (Seoul) Evolution & Molecular Ecology The Japanese otter (Lutra nippon), once inhabited in most islands of Japan, is now considered as an extinct species. Although the Japanese otter is regarded as a distinct species from the Eurasian otter (L. lutra), its phylogeny and taxonomic status are based on limited information on morphological and genetic data, and thus further clarification is required. Here, we assessed the phylogenetic relationship among the genus Lutra and taxonomic status of L. nippon by using the complete sequences of cytochrome b gene of its holotype. The present phylogenic trees supported that the genus Lutra specimens largely formed monophyletic group, with L. sumatrana as a basal to other Lutra species. Within Lutra species, L. nippon was distantly related with L. lutra. The European otter population of L. l. lutra were clustered together with its subspecies, L. l. chinensis rather than the same subspecies, Korean otter population. The discrepancy between the genetic data and traditional taxonomy justifies the necessity of reexamination of the current subspecific classification system of Eurasian otters. Level of genetic divergence between the holotype of L. nippon and L. lutra was two to three-fold lower than those among the other sister species of the Lutrinae. Based on the level of divergence between the L. nippon and L. lutra, and insufficient evidence of morphological difference between them, it is suggested that designation of Japanese otter as a separate species from L. lutra will be reconsidered. Taylor & Francis 2019-05-02 /pmc/articles/PMC6567078/ /pubmed/31231587 http://dx.doi.org/10.1080/19768354.2019.1601133 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Evolution & Molecular Ecology
Park, Han-Chan
Kurihara, Nozomi
Kim, Kyung Seok
Min, Mi-Sook
Han, Sungyong
Lee, Hang
Kimura, Junpei
What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum
title What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum
title_full What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum
title_fullStr What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum
title_full_unstemmed What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum
title_short What is the taxonomic status of East Asian otter species based on molecular evidence?: focus on the position of the Japanese otter holotype specimen from museum
title_sort what is the taxonomic status of east asian otter species based on molecular evidence?: focus on the position of the japanese otter holotype specimen from museum
topic Evolution & Molecular Ecology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6567078/
https://www.ncbi.nlm.nih.gov/pubmed/31231587
http://dx.doi.org/10.1080/19768354.2019.1601133
work_keys_str_mv AT parkhanchan whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum
AT kuriharanozomi whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum
AT kimkyungseok whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum
AT minmisook whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum
AT hansungyong whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum
AT leehang whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum
AT kimurajunpei whatisthetaxonomicstatusofeastasianotterspeciesbasedonmolecularevidencefocusonthepositionofthejapaneseotterholotypespecimenfrommuseum