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Inferring causation from time series in Earth system sciences

The heart of the scientific enterprise is a rational effort to understand the causes behind the phenomena we observe. In large-scale complex dynamical systems such as the Earth system, real experiments are rarely feasible. However, a rapidly increasing amount of observational and simulated data open...

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Autores principales: Runge, Jakob, Bathiany, Sebastian, Bollt, Erik, Camps-Valls, Gustau, Coumou, Dim, Deyle, Ethan, Glymour, Clark, Kretschmer, Marlene, Mahecha, Miguel D., Muñoz-Marí, Jordi, van Nes, Egbert H., Peters, Jonas, Quax, Rick, Reichstein, Markus, Scheffer, Marten, Schölkopf, Bernhard, Spirtes, Peter, Sugihara, George, Sun, Jie, Zhang, Kun, Zscheischler, Jakob
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6572812/
https://www.ncbi.nlm.nih.gov/pubmed/31201306
http://dx.doi.org/10.1038/s41467-019-10105-3
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author Runge, Jakob
Bathiany, Sebastian
Bollt, Erik
Camps-Valls, Gustau
Coumou, Dim
Deyle, Ethan
Glymour, Clark
Kretschmer, Marlene
Mahecha, Miguel D.
Muñoz-Marí, Jordi
van Nes, Egbert H.
Peters, Jonas
Quax, Rick
Reichstein, Markus
Scheffer, Marten
Schölkopf, Bernhard
Spirtes, Peter
Sugihara, George
Sun, Jie
Zhang, Kun
Zscheischler, Jakob
author_facet Runge, Jakob
Bathiany, Sebastian
Bollt, Erik
Camps-Valls, Gustau
Coumou, Dim
Deyle, Ethan
Glymour, Clark
Kretschmer, Marlene
Mahecha, Miguel D.
Muñoz-Marí, Jordi
van Nes, Egbert H.
Peters, Jonas
Quax, Rick
Reichstein, Markus
Scheffer, Marten
Schölkopf, Bernhard
Spirtes, Peter
Sugihara, George
Sun, Jie
Zhang, Kun
Zscheischler, Jakob
author_sort Runge, Jakob
collection PubMed
description The heart of the scientific enterprise is a rational effort to understand the causes behind the phenomena we observe. In large-scale complex dynamical systems such as the Earth system, real experiments are rarely feasible. However, a rapidly increasing amount of observational and simulated data opens up the use of novel data-driven causal methods beyond the commonly adopted correlation techniques. Here, we give an overview of causal inference frameworks and identify promising generic application cases common in Earth system sciences and beyond. We discuss challenges and initiate the benchmark platform causeme.net to close the gap between method users and developers.
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spelling pubmed-65728122019-06-24 Inferring causation from time series in Earth system sciences Runge, Jakob Bathiany, Sebastian Bollt, Erik Camps-Valls, Gustau Coumou, Dim Deyle, Ethan Glymour, Clark Kretschmer, Marlene Mahecha, Miguel D. Muñoz-Marí, Jordi van Nes, Egbert H. Peters, Jonas Quax, Rick Reichstein, Markus Scheffer, Marten Schölkopf, Bernhard Spirtes, Peter Sugihara, George Sun, Jie Zhang, Kun Zscheischler, Jakob Nat Commun Perspective The heart of the scientific enterprise is a rational effort to understand the causes behind the phenomena we observe. In large-scale complex dynamical systems such as the Earth system, real experiments are rarely feasible. However, a rapidly increasing amount of observational and simulated data opens up the use of novel data-driven causal methods beyond the commonly adopted correlation techniques. Here, we give an overview of causal inference frameworks and identify promising generic application cases common in Earth system sciences and beyond. We discuss challenges and initiate the benchmark platform causeme.net to close the gap between method users and developers. Nature Publishing Group UK 2019-06-14 /pmc/articles/PMC6572812/ /pubmed/31201306 http://dx.doi.org/10.1038/s41467-019-10105-3 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Perspective
Runge, Jakob
Bathiany, Sebastian
Bollt, Erik
Camps-Valls, Gustau
Coumou, Dim
Deyle, Ethan
Glymour, Clark
Kretschmer, Marlene
Mahecha, Miguel D.
Muñoz-Marí, Jordi
van Nes, Egbert H.
Peters, Jonas
Quax, Rick
Reichstein, Markus
Scheffer, Marten
Schölkopf, Bernhard
Spirtes, Peter
Sugihara, George
Sun, Jie
Zhang, Kun
Zscheischler, Jakob
Inferring causation from time series in Earth system sciences
title Inferring causation from time series in Earth system sciences
title_full Inferring causation from time series in Earth system sciences
title_fullStr Inferring causation from time series in Earth system sciences
title_full_unstemmed Inferring causation from time series in Earth system sciences
title_short Inferring causation from time series in Earth system sciences
title_sort inferring causation from time series in earth system sciences
topic Perspective
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6572812/
https://www.ncbi.nlm.nih.gov/pubmed/31201306
http://dx.doi.org/10.1038/s41467-019-10105-3
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