Cargando…

The InterMine Android app: Cross-organism genomic data in your pocket

InterMine is a data integration and analysis software system that has been used to create both inter-connected and stand-alone biological databases for the analysis of large and complex biological data sets. Together, the InterMine databases provide access to extensive data across multiple organisms...

Descripción completa

Detalles Bibliográficos
Autores principales: Komkova, Daria, Lyne, Rachel, Sullivan, Julie, Yehudi, Yo, Micklem, Gos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6572867/
https://www.ncbi.nlm.nih.gov/pubmed/31240100
http://dx.doi.org/10.12688/f1000research.17005.2
_version_ 1783427736168038400
author Komkova, Daria
Lyne, Rachel
Sullivan, Julie
Yehudi, Yo
Micklem, Gos
author_facet Komkova, Daria
Lyne, Rachel
Sullivan, Julie
Yehudi, Yo
Micklem, Gos
author_sort Komkova, Daria
collection PubMed
description InterMine is a data integration and analysis software system that has been used to create both inter-connected and stand-alone biological databases for the analysis of large and complex biological data sets. Together, the InterMine databases provide access to extensive data across multiple organisms. To provide more convenient access to these data from Android mobile devices, we have developed the InterMine app, an application that can be run on any Android mobile phone or tablet. The InterMine app provides a single interface for data access, search and exploration of the InterMine databases. It can be used to retrieve information on genes and gene lists, and their relatives across species. Simple searches can be used to access a range of data about a specific gene, while links to the InterMine databases provide access to more detailed report pages and gene list analysis tools. The InterMine app thus facilitates rapid exploration of genes across multiple organisms and kinds of data.
format Online
Article
Text
id pubmed-6572867
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher F1000 Research Limited
record_format MEDLINE/PubMed
spelling pubmed-65728672019-06-24 The InterMine Android app: Cross-organism genomic data in your pocket Komkova, Daria Lyne, Rachel Sullivan, Julie Yehudi, Yo Micklem, Gos F1000Res Software Tool Article InterMine is a data integration and analysis software system that has been used to create both inter-connected and stand-alone biological databases for the analysis of large and complex biological data sets. Together, the InterMine databases provide access to extensive data across multiple organisms. To provide more convenient access to these data from Android mobile devices, we have developed the InterMine app, an application that can be run on any Android mobile phone or tablet. The InterMine app provides a single interface for data access, search and exploration of the InterMine databases. It can be used to retrieve information on genes and gene lists, and their relatives across species. Simple searches can be used to access a range of data about a specific gene, while links to the InterMine databases provide access to more detailed report pages and gene list analysis tools. The InterMine app thus facilitates rapid exploration of genes across multiple organisms and kinds of data. F1000 Research Limited 2019-06-07 /pmc/articles/PMC6572867/ /pubmed/31240100 http://dx.doi.org/10.12688/f1000research.17005.2 Text en Copyright: © 2019 Komkova D et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software Tool Article
Komkova, Daria
Lyne, Rachel
Sullivan, Julie
Yehudi, Yo
Micklem, Gos
The InterMine Android app: Cross-organism genomic data in your pocket
title The InterMine Android app: Cross-organism genomic data in your pocket
title_full The InterMine Android app: Cross-organism genomic data in your pocket
title_fullStr The InterMine Android app: Cross-organism genomic data in your pocket
title_full_unstemmed The InterMine Android app: Cross-organism genomic data in your pocket
title_short The InterMine Android app: Cross-organism genomic data in your pocket
title_sort intermine android app: cross-organism genomic data in your pocket
topic Software Tool Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6572867/
https://www.ncbi.nlm.nih.gov/pubmed/31240100
http://dx.doi.org/10.12688/f1000research.17005.2
work_keys_str_mv AT komkovadaria theintermineandroidappcrossorganismgenomicdatainyourpocket
AT lynerachel theintermineandroidappcrossorganismgenomicdatainyourpocket
AT sullivanjulie theintermineandroidappcrossorganismgenomicdatainyourpocket
AT yehudiyo theintermineandroidappcrossorganismgenomicdatainyourpocket
AT micklemgos theintermineandroidappcrossorganismgenomicdatainyourpocket
AT komkovadaria intermineandroidappcrossorganismgenomicdatainyourpocket
AT lynerachel intermineandroidappcrossorganismgenomicdatainyourpocket
AT sullivanjulie intermineandroidappcrossorganismgenomicdatainyourpocket
AT yehudiyo intermineandroidappcrossorganismgenomicdatainyourpocket
AT micklemgos intermineandroidappcrossorganismgenomicdatainyourpocket