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Plasmid detection and assembly in genomic and metagenomic data sets

Although plasmids are important for bacterial survival and adaptation, plasmid detection and assembly from genomic, let alone metagenomic, samples remain challenging. The recently developed plasmidSPAdes assembler addressed some of these challenges in the case of isolate genomes but stopped short of...

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Detalles Bibliográficos
Autores principales: Antipov, Dmitry, Raiko, Mikhail, Lapidus, Alla, Pevzner, Pavel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6581055/
https://www.ncbi.nlm.nih.gov/pubmed/31048319
http://dx.doi.org/10.1101/gr.241299.118