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Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies
Computational modeling plays an important role in modern neuroscience research. Much previous research has relied on statistical methods, separately, to address two problems that are actually interdependent. First, given a particular computational model, Bayesian hierarchical techniques have been us...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6581260/ https://www.ncbi.nlm.nih.gov/pubmed/31211783 http://dx.doi.org/10.1371/journal.pcbi.1007043 |
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author | Piray, Payam Dezfouli, Amir Heskes, Tom Frank, Michael J. Daw, Nathaniel D. |
author_facet | Piray, Payam Dezfouli, Amir Heskes, Tom Frank, Michael J. Daw, Nathaniel D. |
author_sort | Piray, Payam |
collection | PubMed |
description | Computational modeling plays an important role in modern neuroscience research. Much previous research has relied on statistical methods, separately, to address two problems that are actually interdependent. First, given a particular computational model, Bayesian hierarchical techniques have been used to estimate individual variation in parameters over a population of subjects, leveraging their population-level distributions. Second, candidate models are themselves compared, and individual variation in the expressed model estimated, according to the fits of the models to each subject. The interdependence between these two problems arises because the relevant population for estimating parameters of a model depends on which other subjects express the model. Here, we propose a hierarchical Bayesian inference (HBI) framework for concurrent model comparison, parameter estimation and inference at the population level, combining previous approaches. We show that this framework has important advantages for both parameter estimation and model comparison theoretically and experimentally. The parameters estimated by the HBI show smaller errors compared to other methods. Model comparison by HBI is robust against outliers and is not biased towards overly simplistic models. Furthermore, the fully Bayesian approach of our theory enables researchers to make inference on group-level parameters by performing HBI t-test. |
format | Online Article Text |
id | pubmed-6581260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-65812602019-06-28 Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies Piray, Payam Dezfouli, Amir Heskes, Tom Frank, Michael J. Daw, Nathaniel D. PLoS Comput Biol Research Article Computational modeling plays an important role in modern neuroscience research. Much previous research has relied on statistical methods, separately, to address two problems that are actually interdependent. First, given a particular computational model, Bayesian hierarchical techniques have been used to estimate individual variation in parameters over a population of subjects, leveraging their population-level distributions. Second, candidate models are themselves compared, and individual variation in the expressed model estimated, according to the fits of the models to each subject. The interdependence between these two problems arises because the relevant population for estimating parameters of a model depends on which other subjects express the model. Here, we propose a hierarchical Bayesian inference (HBI) framework for concurrent model comparison, parameter estimation and inference at the population level, combining previous approaches. We show that this framework has important advantages for both parameter estimation and model comparison theoretically and experimentally. The parameters estimated by the HBI show smaller errors compared to other methods. Model comparison by HBI is robust against outliers and is not biased towards overly simplistic models. Furthermore, the fully Bayesian approach of our theory enables researchers to make inference on group-level parameters by performing HBI t-test. Public Library of Science 2019-06-18 /pmc/articles/PMC6581260/ /pubmed/31211783 http://dx.doi.org/10.1371/journal.pcbi.1007043 Text en © 2019 Piray et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Piray, Payam Dezfouli, Amir Heskes, Tom Frank, Michael J. Daw, Nathaniel D. Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies |
title | Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies |
title_full | Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies |
title_fullStr | Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies |
title_full_unstemmed | Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies |
title_short | Hierarchical Bayesian inference for concurrent model fitting and comparison for group studies |
title_sort | hierarchical bayesian inference for concurrent model fitting and comparison for group studies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6581260/ https://www.ncbi.nlm.nih.gov/pubmed/31211783 http://dx.doi.org/10.1371/journal.pcbi.1007043 |
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