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Screening by changes in stereotypical behavior during cell motility
Stereotyped behaviors are series of postures that show very little variability between repeats. They have been used to classify the dynamics of individuals, groups and species without reference to the lower-level mechanisms that drive them. Stereotypes are easily identified in animals due to strong...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6584642/ https://www.ncbi.nlm.nih.gov/pubmed/31217532 http://dx.doi.org/10.1038/s41598-019-45305-w |
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author | Tweedy, Luke Witzel, Patrick Heinrich, Doris Insall, Robert H. Endres, Robert G. |
author_facet | Tweedy, Luke Witzel, Patrick Heinrich, Doris Insall, Robert H. Endres, Robert G. |
author_sort | Tweedy, Luke |
collection | PubMed |
description | Stereotyped behaviors are series of postures that show very little variability between repeats. They have been used to classify the dynamics of individuals, groups and species without reference to the lower-level mechanisms that drive them. Stereotypes are easily identified in animals due to strong constraints on the number, shape, and relative positions of anatomical features, such as limbs, that may be used as landmarks for posture identification. In contrast, the identification of stereotypes in single cells poses a significant challenge as the cell lacks these landmark features, and finding constraints on cell shape is a non-trivial task. Here, we use the maximum caliber variational method to build a minimal model of cell behavior during migration. Without reference to biochemical details, we are able to make behavioral predictions over timescales of minutes using only changes in cell shape over timescales of seconds. We use drug treatment and genetics to demonstrate that maximum caliber descriptors can discriminate between healthy and aberrant migration, thereby showing potential applications for maximum caliber methods in automated disease screening, for example in the identification of behaviors associated with cancer metastasis. |
format | Online Article Text |
id | pubmed-6584642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65846422019-06-26 Screening by changes in stereotypical behavior during cell motility Tweedy, Luke Witzel, Patrick Heinrich, Doris Insall, Robert H. Endres, Robert G. Sci Rep Article Stereotyped behaviors are series of postures that show very little variability between repeats. They have been used to classify the dynamics of individuals, groups and species without reference to the lower-level mechanisms that drive them. Stereotypes are easily identified in animals due to strong constraints on the number, shape, and relative positions of anatomical features, such as limbs, that may be used as landmarks for posture identification. In contrast, the identification of stereotypes in single cells poses a significant challenge as the cell lacks these landmark features, and finding constraints on cell shape is a non-trivial task. Here, we use the maximum caliber variational method to build a minimal model of cell behavior during migration. Without reference to biochemical details, we are able to make behavioral predictions over timescales of minutes using only changes in cell shape over timescales of seconds. We use drug treatment and genetics to demonstrate that maximum caliber descriptors can discriminate between healthy and aberrant migration, thereby showing potential applications for maximum caliber methods in automated disease screening, for example in the identification of behaviors associated with cancer metastasis. Nature Publishing Group UK 2019-06-19 /pmc/articles/PMC6584642/ /pubmed/31217532 http://dx.doi.org/10.1038/s41598-019-45305-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Tweedy, Luke Witzel, Patrick Heinrich, Doris Insall, Robert H. Endres, Robert G. Screening by changes in stereotypical behavior during cell motility |
title | Screening by changes in stereotypical behavior during cell motility |
title_full | Screening by changes in stereotypical behavior during cell motility |
title_fullStr | Screening by changes in stereotypical behavior during cell motility |
title_full_unstemmed | Screening by changes in stereotypical behavior during cell motility |
title_short | Screening by changes in stereotypical behavior during cell motility |
title_sort | screening by changes in stereotypical behavior during cell motility |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6584642/ https://www.ncbi.nlm.nih.gov/pubmed/31217532 http://dx.doi.org/10.1038/s41598-019-45305-w |
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