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Translational bioinformatics in mental health: open access data sources and computational biomarker discovery

Mental illness is increasingly recognized as both a significant cost to society and a significant area of opportunity for biological breakthrough. As -omics and imaging technologies enable researchers to probe molecular and physiological underpinnings of multiple diseases, opportunities arise to exp...

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Autores principales: Tenenbaum, Jessica D, Bhuvaneshwar, Krithika, Gagliardi, Jane P, Fultz Hollis, Kate, Jia, Peilin, Ma, Liang, Nagarajan, Radhakrishnan, Rakesh, Gopalkumar, Subbian, Vignesh, Visweswaran, Shyam, Zhao, Zhongming, Rozenblit, Leon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6585382/
https://www.ncbi.nlm.nih.gov/pubmed/29186302
http://dx.doi.org/10.1093/bib/bbx157
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author Tenenbaum, Jessica D
Bhuvaneshwar, Krithika
Gagliardi, Jane P
Fultz Hollis, Kate
Jia, Peilin
Ma, Liang
Nagarajan, Radhakrishnan
Rakesh, Gopalkumar
Subbian, Vignesh
Visweswaran, Shyam
Zhao, Zhongming
Rozenblit, Leon
author_facet Tenenbaum, Jessica D
Bhuvaneshwar, Krithika
Gagliardi, Jane P
Fultz Hollis, Kate
Jia, Peilin
Ma, Liang
Nagarajan, Radhakrishnan
Rakesh, Gopalkumar
Subbian, Vignesh
Visweswaran, Shyam
Zhao, Zhongming
Rozenblit, Leon
author_sort Tenenbaum, Jessica D
collection PubMed
description Mental illness is increasingly recognized as both a significant cost to society and a significant area of opportunity for biological breakthrough. As -omics and imaging technologies enable researchers to probe molecular and physiological underpinnings of multiple diseases, opportunities arise to explore the biological basis for behavioral health and disease. From individual investigators to large international consortia, researchers have generated rich data sets in the area of mental health, including genomic, transcriptomic, metabolomic, proteomic, clinical and imaging resources. General data repositories such as the Gene Expression Omnibus (GEO) and Database of Genotypes and Phenotypes (dbGaP) and mental health (MH)-specific initiatives, such as the Psychiatric Genomics Consortium, MH Research Network and PsychENCODE represent a wealth of information yet to be gleaned. At the same time, novel approaches to integrate and analyze data sets are enabling important discoveries in the area of mental and behavioral health. This review will discuss and catalog into an organizing framework the increasingly diverse set of MH data resources available, using schizophrenia as a focus area, and will describe novel and integrative approaches to molecular biomarker discovery that make use of mental health data.
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spelling pubmed-65853822019-06-25 Translational bioinformatics in mental health: open access data sources and computational biomarker discovery Tenenbaum, Jessica D Bhuvaneshwar, Krithika Gagliardi, Jane P Fultz Hollis, Kate Jia, Peilin Ma, Liang Nagarajan, Radhakrishnan Rakesh, Gopalkumar Subbian, Vignesh Visweswaran, Shyam Zhao, Zhongming Rozenblit, Leon Brief Bioinform Paper Mental illness is increasingly recognized as both a significant cost to society and a significant area of opportunity for biological breakthrough. As -omics and imaging technologies enable researchers to probe molecular and physiological underpinnings of multiple diseases, opportunities arise to explore the biological basis for behavioral health and disease. From individual investigators to large international consortia, researchers have generated rich data sets in the area of mental health, including genomic, transcriptomic, metabolomic, proteomic, clinical and imaging resources. General data repositories such as the Gene Expression Omnibus (GEO) and Database of Genotypes and Phenotypes (dbGaP) and mental health (MH)-specific initiatives, such as the Psychiatric Genomics Consortium, MH Research Network and PsychENCODE represent a wealth of information yet to be gleaned. At the same time, novel approaches to integrate and analyze data sets are enabling important discoveries in the area of mental and behavioral health. This review will discuss and catalog into an organizing framework the increasingly diverse set of MH data resources available, using schizophrenia as a focus area, and will describe novel and integrative approaches to molecular biomarker discovery that make use of mental health data. Oxford University Press 2017-11-27 /pmc/articles/PMC6585382/ /pubmed/29186302 http://dx.doi.org/10.1093/bib/bbx157 Text en © The Author 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Paper
Tenenbaum, Jessica D
Bhuvaneshwar, Krithika
Gagliardi, Jane P
Fultz Hollis, Kate
Jia, Peilin
Ma, Liang
Nagarajan, Radhakrishnan
Rakesh, Gopalkumar
Subbian, Vignesh
Visweswaran, Shyam
Zhao, Zhongming
Rozenblit, Leon
Translational bioinformatics in mental health: open access data sources and computational biomarker discovery
title Translational bioinformatics in mental health: open access data sources and computational biomarker discovery
title_full Translational bioinformatics in mental health: open access data sources and computational biomarker discovery
title_fullStr Translational bioinformatics in mental health: open access data sources and computational biomarker discovery
title_full_unstemmed Translational bioinformatics in mental health: open access data sources and computational biomarker discovery
title_short Translational bioinformatics in mental health: open access data sources and computational biomarker discovery
title_sort translational bioinformatics in mental health: open access data sources and computational biomarker discovery
topic Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6585382/
https://www.ncbi.nlm.nih.gov/pubmed/29186302
http://dx.doi.org/10.1093/bib/bbx157
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